Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0373 ATGGCCGATAAGCAACCCCAGTTGAACGGTGCGTTTTACGGTCCCGCCATTCCCCCAGCGGAGCAACCACGCTACCGCCACCACCACCATCGCGGCCGAAGCTGTTGTTGCTGCCTCTTCGGAATCTTCTGGAAGATTCTGGTAGCACTCGTCGTCCTCGCTGGCCTCGCGATTCTCATCTTCTGGCTCGTTGTTCAACCCCGGTCATTCAAGTTCTACGTCACTGAAGCCAACCTAAAGCAATTCGAATACTACAGCAACAACAACACCCTCCACTACGACATGGTGCTAAACTTCACTGCCCGCAACCCCAACAAGAAGCTCAGCATCTACTACGACAAAGTGGAGGCCGTGGCATTCTACGAGGGTACGAGGTTCGCTAATTATGACGTCATCACACACTTGAACTCCTTTCGACAGTACAAGAAGACCACGAGCCCCATGAGCGCCGTTTTCACAGGCCCTAGAGTGGTCATGCTCGACAATGATCAAGTCTCTAAGCTCAACCAAGACAAGATAGATGGAGTTTATGATATTTATGTGAGGCTATACTTCAGGATTAGGTACAGGCTCGGCGATGTGAAATCTGGCGACTACAAGCCCAAGGTTAAATGTGACCTTAGGGTTCCCTTCACATCTAACAATACCGTAACTCTGTTTGTGCCCACCAAGTGCAAGGTCGATTACTAG 690 0.5058 MADKQPQLNGAFYGPAIPPAEQPRYRHHHHRGRSCCCCLFGIFWKILVALVVLAGLAILIFWLVVQPRSFKFYVTEANLKQFEYYSNNNTLHYDMVLNFTARNPNKKLSIYYDKVEAVAFYEGTRFANYDVITHLNSFRQYKKTTSPMSAVFTGPRVVMLDNDQVSKLNQDKIDGVYDIYVRLYFRIRYRLGDVKSGDYKPKVKCDLRVPFTSNNTVTLFVPTKCKVDY* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0373 229 Pfam Late embryogenesis abundant protein 99 205 IPR004864 -
Apr4g0373 229 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 22 227 - -
Apr4g0373 229 PANTHER OS05G0367900 PROTEIN 22 227 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0373 Apr-Chr4 3169711 3170910 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0373 64 216 SNARE and Associated Proteins AT1G32270 32.484 5.55e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0373 - - gmx:100807701 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0373 4 3169711 3170910 Apr4g0373 4 3169711 3170910 ECH
Apr4g0373 4 3169711 3170910 Apr8g0670 8 6246120 6247322 PCT