Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0372 ATGTATGAGAAACAGCCCCAGTTGAACGGAGCCTACTACGGCCCTTCCATTCCGCCGGCAAAATCTTACCACCGTCCAGCGCGCCGCGGCGGATGCGACTGCTGCTGCGGCTGTCTCTTCAGCCTCATCTTCAAACTCATCCTCACCGTCGTCATCATCGTGGGCATCGCGGTTTTCCTCTTCTGGCTCATCGTTCGACCCAACGTGGTGAAAGTCCACGTCACCGATGCTTCTCTCACCCAATTCAACTACACAGGCAACACCCTCCACTACGACCTCGCTCTCAACATCACTGTTCGCAACCCCAACAAGAGGCTGGGTATCTACTACGACTACATCGAAGCGAGGGCACTGTTCCAGGACGCTAGGTTGAATTCTGATTTCCTTGACCCCTTCTATCAGGGCCACAAGACCACGAACATGTTGAACCCAGTGTTCAAGGGTCAACAGATAGTGACGCTTAACGCTGACCAAACTGCGGAACTGAATAAGGAAAAAAACTCTGGGGTTTTCGAGATTGACGTGAAGCTGTATCTGAGGGTTAGATTCAAGTTGGGAGTGTTCAAGACCAAGACCCTGAAGCCCAAGGTTAGCTGTGACTTGCACGTTCCTTTTACTTCAGCTACAGGAACCACGCCGGCGGCCGGTGGCTTTCAGATCACCAAGTGTGACTGGGATCGCTGA 684 0.5278 MYEKQPQLNGAYYGPSIPPAKSYHRPARRGGCDCCCGCLFSLIFKLILTVVIIVGIAVFLFWLIVRPNVVKVHVTDASLTQFNYTGNTLHYDLALNITVRNPNKRLGIYYDYIEARALFQDARLNSDFLDPFYQGHKTTNMLNPVFKGQQIVTLNADQTAELNKEKNSGVFEIDVKLYLRVRFKLGVFKTKTLKPKVSCDLHVPFTSATGTTPAAGGFQITKCDWDR* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0372 227 Pfam Late embryogenesis abundant protein 96 199 IPR004864 -
Apr4g0372 227 PANTHER OS05G0367900 PROTEIN 25 225 IPR044839 GO:0098542
Apr4g0372 227 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 25 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0372 Apr-Chr4 3166763 3167941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0372 64 219 SNARE and Associated Proteins AT1G32270 36.306 4.51e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0372 - - gmx:100793187 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0372 4 3166763 3167941 Apr8g0667 8 6220881 6221641 PCT