Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0344 ATGGAAAATATGCCACCAGGTTATCGTTTCTACCCCACAGAAGAGGAACTGATTTTGTTCTATCTCCACAATAAGCTTGAAGGAGACAAGGAGTGCCTGAATCGAGTTATACCTGTCGTCGATATATATGACTACAACCCATCCCAACTTCCACAAATTTCAGGAGAGGGGAGTCTGAGAGACACAGAGCAATGGTTCTTTTTCATTCCGAGGCAAGAAAGTGAAGCACGAGGAGGGAGACCAAAGCGTCTTACAACTACTGGGTACTGGAAAGCTACTGGGTCTCCTAATCACGTTTATTCTTCTGATAATCGCATCATCGGAGTGAAAAGAACTATGGTTTTCTATAGTGGAAGAGCTCCTAATGGAACGAAAAGCGATTGGAAGATGAATGAGTACAAGGCCATTAAAGGTGAAGCATCATCATCTTCAAATAAGGCAGTTCCTCAGCTAAGGCAAGAATTCAGTTTATGCCGAGTGTACAAAAAATCAAAGTGCTTGCGGGCATTTGATAGACGACCACCGCCAAGGAGGGATGCAGTAAGCTATCCTTTTGTTCAAGAAGCTCAAAGGGGTTCAACATCTTGTGATCATCATCATAACCTTCCACAAATGGTGGAGAGAAGCTCAACTAGCTCCCCAGAGAGTTCATCCTCTGGAGACCATGCCCAACCCTCCCTGCAAATGGATGTTGACAACGAGGCTTTGTTGGATTGGGAGAAAGTAGATTGGTTCTTGGGATCGGAACCATGA 753 0.4449 MENMPPGYRFYPTEEELILFYLHNKLEGDKECLNRVIPVVDIYDYNPSQLPQISGEGSLRDTEQWFFFIPRQESEARGGRPKRLTTTGYWKATGSPNHVYSSDNRIIGVKRTMVFYSGRAPNGTKSDWKMNEYKAIKGEASSSSNKAVPQLRQEFSLCRVYKKSKCLRAFDRRPPPRRDAVSYPFVQEAQRGSTSCDHHHNLPQMVERSSTSSPESSSSGDHAQPSLQMDVDNEALLDWEKVDWFLGSEP* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0344 250 SUPERFAMILY NAC domain 2 163 IPR036093 GO:0003677|GO:0006355
Apr4g0344 250 MobiDBLite consensus disorder prediction 205 226 - -
Apr4g0344 250 ProSiteProfiles NAC domain profile. 4 163 IPR003441 GO:0003677|GO:0006355
Apr4g0344 250 MobiDBLite consensus disorder prediction 205 232 - -
Apr4g0344 250 Gene3D NAC domain 13 167 IPR036093 GO:0003677|GO:0006355
Apr4g0344 250 Pfam No apical meristem (NAM) protein 5 134 IPR003441 GO:0003677|GO:0006355
Apr4g0344 250 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 244 - -
Apr4g0344 250 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0344 Apr-Chr4 2943753 2946371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0344 7 244 NAC Transcription Factor Family AT5G22380 48.347 1.87e-75 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr4g0344 NAM 1.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0344 - - gmx:100800056 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0344 4 2943753 2946371 Apr4g0344 4 2943753 2946371 ECH