Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0320 ATGGTGGTTGAGGAGAACGAGATGAACGCACAGGGCGTGGTGGAACACAAGAACCATCACTCTCCATTGTCATCGTCACTTGGAAGACAATCATCAATATACTCTCTCACACTAGACGAGTTCCAACACAGTCTATGTGAGAGTGGCAAGAACTTCGGGTCCATGAACATGGACGAGTTCTTAAGCAGCATTTGGAACGCTGAAGAGAACCAAGGAATAATAATAAATTCTTCCAACTCCCAAACTAATAACAACATAGACAAAGGAACCACAATGATAAGGAAGCAACCAAGTCTACCTCGCCAACCTTCACTATCCATTCCTGCACCACTTTGTAGAAAAACAGTGGACCAAGTTTGGTCTGAGATACAAAAGGAAAACAATAACAGCAGCAACAACAACGTTCAGAATACTGATTCTGCCCCTCGTCAACCCACTTTTGGTGAGATGACTTTGGAGGATTTTTTGGTTAAAGCAGGGGTAGTTCGGGAACCATGCGTGCAACCACCGCTCCCTCACTCTCATCATTACCCAAGTAATAACGCTACAATGACAATGGGTCCTTCTTTTGTTGGAAGTCATGTTATTGGTGGTGGTGTAGTGAATAATGTGGTTGCACCTCCTTATCAAGTTGGAGAGGTTTCTGGGTATGCTGGAAATGGTAAAAGGGATGGTGGTGGTGGTGGGTACCCTCCTCCACAAGGGGTTTGCTTTGGAGGGGGTGGGTATGGGGTAGCACCCTCCATGGGAATGGGTGCACCTGTGAGCCCAGCTAATTCATCTGATGGGATGGGGAATGAGAACTCTGGTGGTCAATTTGGGCTTGACATGGGTGGTTTGAGAGGTAGAAAGAGGATGGTAGATGGTCCTGTGGAAAAGGTGGTGGAGAGAAGGCAGAGAAGGATGATCAAGAATAGAGAATCAGCTGCTCGATCTAGAGCCAGAAAACAGGCATACACAGTTGAGTTGGAAGCAGAACTGAACCAATTAAGAGAAGAAAATGCCCAACTGAAACAGGCGCTGGCAGAGCTCGAGAGGAGAAGAAAGCAACAGCAGTGTTTTGAGGAAGTGAACGTGAGAGTTCAAACCAAAGTTCAGCAGGCGAAAGAGAAACTGAGAGCGCTCAGAAGGAACCTGAGCTGTCCTTTATGA 1152 0.4653 MVVEENEMNAQGVVEHKNHHSPLSSSLGRQSSIYSLTLDEFQHSLCESGKNFGSMNMDEFLSSIWNAEENQGIIINSSNSQTNNNIDKGTTMIRKQPSLPRQPSLSIPAPLCRKTVDQVWSEIQKENNNSSNNNVQNTDSAPRQPTFGEMTLEDFLVKAGVVREPCVQPPLPHSHHYPSNNATMTMGPSFVGSHVIGGGVVNNVVAPPYQVGEVSGYAGNGKRDGGGGGYPPPQGVCFGGGGYGVAPSMGMGAPVSPANSSDGMGNENSGGQFGLDMGGLRGRKRMVDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENAQLKQALAELERRRKQQQCFEEVNVRVQTKVQQAKEKLRALRRNLSCPL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0320 383 Coils Coil 313 354 - -
Apr4g0320 383 CDD bZIP_plant_BZIP46 297 351 - -
Apr4g0320 383 SUPERFAMILY Leucine zipper domain 297 347 IPR046347 GO:0003700|GO:0006355
Apr4g0320 383 Gene3D - 295 351 - -
Apr4g0320 383 MobiDBLite consensus disorder prediction 126 146 - -
Apr4g0320 383 Coils Coil 358 378 - -
Apr4g0320 383 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 300 315 IPR004827 GO:0003700|GO:0006355
Apr4g0320 383 Pfam bZIP transcription factor 297 349 IPR004827 GO:0003700|GO:0006355
Apr4g0320 383 PANTHER ABA RESPONSE ELEMENT-BINDING FACTOR 3 382 IPR029803 GO:0003700|GO:0005634|GO:0009737|GO:0045893
Apr4g0320 383 MobiDBLite consensus disorder prediction 126 145 - -
Apr4g0320 383 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 295 347 IPR004827 GO:0003700|GO:0006355
Apr4g0320 383 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 3 382 IPR043452 GO:0003700|GO:0045893
Apr4g0320 383 SMART brlzneu 293 357 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0320 Apr-Chr4 2774198 2779165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0320 25 351 bZIP Transcription Factor Family AT2G36270 54.026 3.12e-105 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr4g0320 bZIP_1 2.4e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0320 K14432 - gmx:100818567 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0320 4 2774198 2779165 Apr4g0320 4 2774198 2779165 ECH
Apr4g0320 4 2774198 2779165 Apr8g0618 8 5674806 5678594 PCT