Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0311 ATGGACTCTCACAAGCACCTCTTCCCCCTTCTCTCCCTTTTCCTAATTCTACATCTCTCAGGACAAAGGGTGTTGCAAGCTGAGGCTCACTCTCAATATCTCCCAACAAAACTGTTCGTTTTTGGGGATTCATATGCTGACACAGGCAACGTTAAGAAAGGGATATCAAATTCATGGAAAGACCCTTATGGCGTCACCTTTCCCGGCAAACCCGCCGGTCGATTTTCCGACGGTAGAGTCCTCACCGACTACATTGCAAAGTATTTGAAAGTGAAATCGCCAATCCCTTATAAATTGAGGAAACTGATACCAGAGCATGTGAAATATGGGATGAACTTTGCATTTGGGGGTACTGGTGTCTTTAACACGTCCACTCCGGGCCCAAACATGACGGCGCAAATTGATTTGTTCCATCAGGTCATCAAATACAAAGTGTATTCTGCCTCAGATCTCAGCAACTCTGTGGCCTTTGTCTCTGTCGCTGGAAATGACTACAGTAATTACTTGGTCACAAATGGCTCTGCTCAGGGTTTACCATATTTTGTGGCCTCGGTGGTTAATCAAACAACAAATAATCTGATTCGCATCAAAGGGTTGGGAGTGAAGAAAATTGTTGTGGGTGGTCTACAACCCCTTGGATGTCTTCCTCAGATCACAGCCTCGACCTCATTCCAACATTGCAACGCCACCTCAAACGCCTTCGTTCTTCTCCATAACAACCTCTTGAACCAAGCCGTGACCAAATTGAACCAAGAAACGAAGGACCATTCCACCTTCCTGGTCCTTAACCTTTACGACAGCTTCATGTCAGTGCTGAACCACCCATCAACCCACAACATTCATAACAATTTGACGCCATGCTGCGTTGGGGTAAGCAATGAGTACTCGTGTGGGAGTGTGGACAACAACATGGTTAAGAAATATCGAGTTTGTGATGATCCCAAATCGGCTTTCTTTTGGGATCTTGTGCACCCAACACAGGCTGGGTGGCACGCCGTGTATAACAAGTTGCGAACAATGAATAACCTTCAACTCATTCGTTACTAG 1047 0.4575 MDSHKHLFPLLSLFLILHLSGQRVLQAEAHSQYLPTKLFVFGDSYADTGNVKKGISNSWKDPYGVTFPGKPAGRFSDGRVLTDYIAKYLKVKSPIPYKLRKLIPEHVKYGMNFAFGGTGVFNTSTPGPNMTAQIDLFHQVIKYKVYSASDLSNSVAFVSVAGNDYSNYLVTNGSAQGLPYFVASVVNQTTNNLIRIKGLGVKKIVVGGLQPLGCLPQITASTSFQHCNATSNAFVLLHNNLLNQAVTKLNQETKDHSTFLVLNLYDSFMSVLNHPSTHNIHNNLTPCCVGVSNEYSCGSVDNNMVKKYRVCDDPKSAFFWDLVHPTQAGWHAVYNKLRTMNNLQLIRY* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0311 348 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 348 - -
Apr4g0311 348 SUPERFAMILY SGNH hydrolase 36 337 - -
Apr4g0311 348 CDD SGNH_plant_lipase_like 38 337 IPR035669 -
Apr4g0311 348 Pfam GDSL-like Lipase/Acylhydrolase 38 336 IPR001087 GO:0016788
Apr4g0311 348 Gene3D SGNH hydrolase 26 343 IPR036514 -
Apr4g0311 348 PANTHER OSJNBB0059K02.9 PROTEIN 1 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0311 Apr-Chr4 2687480 2691481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0311 10 333 Pollen Coat Proteome AT1G75930 29.261 4.32e-29 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0311 - - gmx:100818373 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0311 4 2687480 2691481 Apr8g0606 8 5539391 5542768 PCT