Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0308 ATGATACCCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTTCGGTTCCCTCTGCTACCTCTTCCCACCGTTACACTAATTTCTCTCTCTTTCCTCTGTGATTGTGCCATCGACAACACCATCATGGATGCGGAATCCGAGAAGCTCTCTGCATCCACCTCTTCTGCTTCGTCTTCTTTTTCGTCTTCGTCCGCCTCGGAGGAGCGCGTGGATCGGCTACTCCACACGCAGGAGATTGAAGCGGCGGAGACTCTCGCGCACTTGGCAATGCGCGACTCTCACTCCGCCGATAAATGGCGCGGCAAACGAGCCACGAGTCGATTCACTCGCGAGTCACCGACTCCTGACTCGGATCTCTCTCACTCTCCTCTTGGGCCTGGGGGAAAAGCTGTTGCAGGTCAGCATCTACATGAGAAAATATCCACCACTGCATCTGTAGAAACAGAAAGGATTCCGCAAGATGACAGCTCGAGACACATGAAGGTGGAGCAGGATGCTGGATTATTACCTAAGACTACAAGTTACTCTATAGTTCGATGTAGCAAATCAAGGAGAAATTTAACTGAGGAAGAAAAAGAAGCAAGGAGGATCCGCAGGGTATTGGCAAATAGAGAGTCAGCAAGGCAGACAATTCGCCGTAGGCAGGCTCTATGTGAAGAGTTAACCAGAAAAGCTGCCACTTTGGTGTTGGAGAATGAAAACCTGAAGAAGGAGAAGGAGTTGGCTTTGAAAGAGTATCAGTCTTTGGAGACTACAAATAAGCATTTAAAGGCACAAATAGCCAAGTCAGTAAACGCTGAGGTGGAGAAAACACCTGTTGAGCCCAAATCATCTGTGACTGCGGTTACACCTCTGTCTGGTAACAGTCCATGGTTCCTTTATAACCATTTTCCAGTTACACAGATATTTTGGCCTTCCATCCTTCAATCTTCTAATCCAGCTCAATTACAACAGACACCATTTAATTCCATCGCTGTTCCACCTAATTCCAACATGCCATGTTCTTCTGAGTCTGTTTCATGTTTCCAGCAAAATAACCTTGTAAATGATAATCGACCTCAAAATCCGTTGTATATGTTTCCATGTCCATGGTTGTTCCCCCTTCCAGTGTTTGGAAATGGACAACCATCACCTTCCAGTAGCGTAAAAGATAAACAAGATAAGCTTTCTCTAGGTAAACAATGTAGTTCTAGTTCATCTTTGAAGACACTGGCAAATGTGGATTATCAAGCTGCTCTACCTGTCAAACTTAAAACAGAAGCTTCTGGCTGGACAGAGGCCCTACCTATTAATGACACTGGTTGTGCCACTCCAAGATTTTCTTTGGATGGAGGTGAGAAGAAAATAGGATGTCACATTATAGAAAAGTTCCATGGACCTGCATTTTGCTGTAATGGTCATGTTTCTACTGTTAAACAAGAACATGAGCTTCAATTACATTTTGCCCCTAACACTAAGGTACCTTCAACAGCTTCTTACAATGCAACTTCTTCACTGGAAAAGAAACAAGAACAGTGCATATGCCAGGGTAAAAATCTAGTAGATGCAGTTGCTGCAGCAGAAGCAAGAAAGAGGAGAAAGGAGCTAACAAAGCAGAAAAGCATCCATCACCGTCAGTCTCGAATGCACTGTTGA 1632 0.4485 MIPSLSLSLSLCVRFPLLPLPTVTLISLSFLCDCAIDNTIMDAESEKLSASTSSASSSFSSSSASEERVDRLLHTQEIEAAETLAHLAMRDSHSADKWRGKRATSRFTRESPTPDSDLSHSPLGPGGKAVAGQHLHEKISTTASVETERIPQDDSSRHMKVEQDAGLLPKTTSYSIVRCSKSRRNLTEEEKEARRIRRVLANRESARQTIRRRQALCEELTRKAATLVLENENLKKEKELALKEYQSLETTNKHLKAQIAKSVNAEVEKTPVEPKSSVTAVTPLSGNSPWFLYNHFPVTQIFWPSILQSSNPAQLQQTPFNSIAVPPNSNMPCSSESVSCFQQNNLVNDNRPQNPLYMFPCPWLFPLPVFGNGQPSPSSSVKDKQDKLSLGKQCSSSSSLKTLANVDYQAALPVKLKTEASGWTEALPINDTGCATPRFSLDGGEKKIGCHIIEKFHGPAFCCNGHVSTVKQEHELQLHFAPNTKVPSTASYNATSSLEKKQEQCICQGKNLVDAVAAAEARKRRKELTKQKSIHHRQSRMHC* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0308 543 Pfam bZIP transcription factor 190 252 IPR004827 GO:0003700|GO:0006355
Apr4g0308 543 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 192 255 IPR004827 GO:0003700|GO:0006355
Apr4g0308 543 Coils Coil 203 258 - -
Apr4g0308 543 SUPERFAMILY Leucine zipper domain 194 249 IPR046347 GO:0003700|GO:0006355
Apr4g0308 543 PANTHER G-BOX-BINDING FACTOR 3-RELATED 41 538 IPR044827 GO:0003700|GO:0006355|GO:0043565
Apr4g0308 543 MobiDBLite consensus disorder prediction 528 543 - -
Apr4g0308 543 CDD bZIP_plant_GBF1 195 246 IPR045314 GO:0003700|GO:0006355
Apr4g0308 543 SMART brlzneu 190 254 IPR004827 GO:0003700|GO:0006355
Apr4g0308 543 MobiDBLite consensus disorder prediction 91 161 - -
Apr4g0308 543 MobiDBLite consensus disorder prediction 524 543 - -
Apr4g0308 543 MobiDBLite consensus disorder prediction 91 108 - -
Apr4g0308 543 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN 41 538 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0308 179 543 bZIP Transcription Factor Family AT1G19490 36.066 5.65e-56 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr4g0308 bZIP_1 1.4e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0308 - - gmx:778152 697.967