Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0305 ATGGGTTCATACTCTGGCACTTGTGAAATAGTTGAAGCAAGGGAGGAGCTAAATACACGGAAAGCTCCTGGGATTTATCAGTCCAATTCTGAATGTAGCACATCTGAGAAAAATCAGAAACTTTCAATGCTGAAACTGGGATACAAGAATGATCTAGATGATGATATTAATAAACTGTTTGAATCAATTTCTCTTAAATCTTCATCAAGGGATTTGGGCCTTTTACAAGATGGTACAAGCCCTAAACTGAAAAATGCATTAAAAAAGCCTATGACAATGGGCGTTTCTCGGTCCCCAAGAGTTGGAGCTGCTGAGCCTGTTAATTTGAAACAAGCATTAAGAGACCTGTGTATATCTAAGGCATCAGAAATGGCTGCTACGAAACGATTATCAAAATCAACAGCTTCTCCGAGAATATCAGAGGTTGGAAAGATACAGACATTGTACAATTCAGTTGTAGCAGAAACCAGTCGATCTGGGTCTTCCTCTGTTGAGAGCAAATGGTGTCAAATTGAAATATCTCAGGTGCCAGAAGAAAGCAAATCATTTTCCTTGAAGAAAATCTCCCCGTCTCATCAAACTGCACAAGTCACATCGTTGAGCCAAAACATTCATTCGTCTTGTGATATTGCGGTTGCAACTACTCAAAATGATTCTGGGATTTCATTGATCCGAAGTGGTTTGGCATGCTCATCAAGTAAAATCGGGGTTCAATCACCACGAGTGGTACCTGTTCAAACAGTAGAACACGCTTCTGCTTCTTCTCCATCTCTTTATAATACTCTCGGAAGCAAATTAGAGCTGCCCAAAAATGTATCTTCCCCTAAAAAGTTAGGAAATAAAGCGCTTGTGTCAAATACAGGGCGGAAAGGTAGGTTGCAAACAGCATCTTCTTCTCCATCTACTTCTGTAAATGGCAACAGAGTTAACAAGCTGCCACGCCATGCTCCCCGTACAGTTAAATCAGTCATCAAGAACATGAGTAAGAAGAAACTAAAGGAGGATTCAGATTCAGATTTAAGTGGTCCTACATTTATTGAAGTTAATAAGCCAGTTGCTGGTACACCTCGGCTGGTTTGTGAGAGATGTAGGTGTGCTTTAGAAAATACAAGTGATGAAAAAAACCAAGATATTATGGCATCGGACTCTACTAGTCCTGGAAATGGAGTAAACTTGAGTAATGTGCAATCTGGTTCAAATGGTTTGGTTTCAACAAGTGGTAATAAAAGCAAAACAGCTGCAAAAGTGAAGAAGAGCACCAAGTTGAAAGAGCAACTTGAGTTTTCACAAAGTTCAAAAAGTAGTCAGGGTGAGTACAGTAGTAGTACCAGTACCAGTGATGAGAGCAATTTAAGTGGCTCAAGTCGTGGCACCAGGCCTCACATGTCAAAGGATGTTAGATGGGCAGCCATACGACATGCTCAAGTGCAGCATGGAGTCTTGGGCTTGAGACACTTCAATCTTTTAAAGAAACTTGGTTGTGGAGACATCGGAACTGTATATCTTGCCGAACTAATTGGCACAAGTTGTTTGTTTGCTATTAAGGTCATGGACAATGAATTTTTGGAAAGAAGGAAGAAGACTCCTAGAGCTCAAACTGAAAGAGAAATATTAAGGATGCTGGATCATCCATTTCTTCCCACACTGTATATGCAATTTACATCAGACAATCTATCATGTCTGGTCATGGAATATTGTCCAGGTGGAGATCTTCATGTTCTGCGTCAGAAGCAGCTTGGTAGAAGTTTCTCAGAGCCAGCAGCAAGATTTTATGTTGCTGAAGTGCTCCTTGCTTTGGAGTACCTGCACATGCTCGGAGTTATTTACCGAGATTTGAAACCTGAAAACATTCTTGTTCGAGAAGATGGCCACATTATGCTCACTGATTTTGATCTGTCACTGAGGTGTGCTGTCAGCCCAACGCTTCTGAAATCATCTTCTGATGTTGATCCTGCAAAAATTTCTGGTCTAAGTGCACAATCAAGTTGCATTGAGCCGTTCTGCATTGAACCATCCTGTCAAGTTCCATGCTTCAGCCCTAGATTCTTACCTGCTGCTGCAAAAGCAAGGAAGTTTAAAGTTGATCATGCTGCCCAGGTAAGATCATTGCCACAGCTCGTGGCCGAGCCCACTGATGCAAGATCAAACTCATTTGTTGGTACACATGAATACCTGGCTCCTGAGATCATCAAAGAAGAGGGACATGGAGCTGCCGTTGACTGGTGGACATTTGGTGTTTTTCTCTATGAGCTTTTATACGGTAGAACACCCTTCAAAGGTTCTAACAATGAAGAAACATTGGCAAACGTGGTGTTGCAGAGTCTTAGATTCCCTGACGACCCTTTTGTTAGTTTTCAAGCAAAAGATCTAATTAGAGGGTTGTTGGTTAAAGAGCCTGAAAATCGTTTGGGTTCAGAGAAAGGAGCTGCTGAGATTAAACAGCATCCCTTCTTCGAGGGCCTTAACTGGGCCTTAATTCGCTGCTCTGTCCCACCAGAAATTCCCGAGTATTGTGATTTTGGAGTTTCAGACATGATGAACTTGCAGGTCAAAGGTGCTAAGTACTTGGAGTATAAAGCAGGAGAGCATGTAGAATTCGAGTTGTTTTAA 2610 0.4157 MGSYSGTCEIVEAREELNTRKAPGIYQSNSECSTSEKNQKLSMLKLGYKNDLDDDINKLFESISLKSSSRDLGLLQDGTSPKLKNALKKPMTMGVSRSPRVGAAEPVNLKQALRDLCISKASEMAATKRLSKSTASPRISEVGKIQTLYNSVVAETSRSGSSSVESKWCQIEISQVPEESKSFSLKKISPSHQTAQVTSLSQNIHSSCDIAVATTQNDSGISLIRSGLACSSSKIGVQSPRVVPVQTVEHASASSPSLYNTLGSKLELPKNVSSPKKLGNKALVSNTGRKGRLQTASSSPSTSVNGNRVNKLPRHAPRTVKSVIKNMSKKKLKEDSDSDLSGPTFIEVNKPVAGTPRLVCERCRCALENTSDEKNQDIMASDSTSPGNGVNLSNVQSGSNGLVSTSGNKSKTAAKVKKSTKLKEQLEFSQSSKSSQGEYSSSTSTSDESNLSGSSRGTRPHMSKDVRWAAIRHAQVQHGVLGLRHFNLLKKLGCGDIGTVYLAELIGTSCLFAIKVMDNEFLERRKKTPRAQTEREILRMLDHPFLPTLYMQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRSFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCAVSPTLLKSSSDVDPAKISGLSAQSSCIEPFCIEPSCQVPCFSPRFLPAAAKARKFKVDHAAQVRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKEEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQSLRFPDDPFVSFQAKDLIRGLLVKEPENRLGSEKGAAEIKQHPFFEGLNWALIRCSVPPEIPEYCDFGVSDMMNLQVKGAKYLEYKAGEHVEFELF* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0305 869 SMART serkin_6 486 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0305 869 Pfam Protein kinase domain 487 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0305 869 Pfam Protein kinase domain 715 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0305 869 ProSiteProfiles Protein kinase domain profile. 486 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0305 869 Gene3D Transferase(Phosphotransferase) domain 1 566 634 - -
Apr4g0305 869 PANTHER FLIPPASE KINASE 1-RELATED 1 869 - -
Apr4g0305 869 MobiDBLite consensus disorder prediction 376 413 - -
Apr4g0305 869 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Apr4g0305 869 SUPERFAMILY Protein kinase-like (PK-like) 462 844 IPR011009 -
Apr4g0305 869 Gene3D Phosphorylase Kinase; domain 1 484 565 - -
Apr4g0305 869 Gene3D Transferase(Phosphotransferase) domain 1 711 836 - -
Apr4g0305 869 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 869 - -
Apr4g0305 869 MobiDBLite consensus disorder prediction 287 309 - -
Apr4g0305 869 CDD STKc_phototropin_like 484 836 - -
Apr4g0305 869 MobiDBLite consensus disorder prediction 270 348 - -
Apr4g0305 869 MobiDBLite consensus disorder prediction 376 461 - -
Apr4g0305 869 MobiDBLite consensus disorder prediction 425 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0305 Apr-Chr4 2639025 2644239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0305 1 869 AGC Kinase Gene Family AT2G36350 50.052 0.0 829
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Apr4g0305 Pkinase 3.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0305 - K08286 gmx:100792120 1396.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0305 4 2639025 2644239 Apr8g0598 8 5416508 5422867 PCT