Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0302 ATGGAATCGTCATTAGTGGAAAATGCTCCACCCATTTCCACAAGCAGTGGTGACCGGAGCTTGAGTTTCAGGGAGACGTTTATGGCTGCGGCACTGGGCGTGTTCAGCGCGAGTAGTCGCCACTCGCACAACGATGACGAAGACGAACTCAAATGGGCTGCTATTGAGCGTTTGCCAACTTATGACCGCATAAGAAAAGGGTTGCTGAAGCAAGTCCTTGATGATGGAAAAGTTGTGTCTCATGAAATTGATGTTACCAAGCTTGGTTTCCATGACAAGAAGACTCTAATGGATACCGTGTTCAAGGTTGTGGAGGAAGACAACGAGAAGTTCTTACGTAGAGTCAGAGACAGAGTTGATAGTGTGGGGATTGATGTTCCAAAGATTGAAGTGCGGTACGAGAATTTGACGGTGGAGGGAAATGTGCATGTTGGGAGCCGAGCCCTTCCTACCCTCCGTAATACTGCTCTCAACTTTTTGGAGAGTATTATGGGAATGTTTCACTTTGCACCCTCCAAGAAGAAAGAAATTCAGATTCTTAGAAACATCAGTGGAATCATCAAACCCTCAAGGATGACATTACTTTTGGGTCCTCCAGGGGCAGGAAAAACAACGTTGCTTTTGGCACTTGCAGAAAAACTTGACCAGGAGTTGAAGGTTTCTGGGAGAATTACATATTGTGGGCATGAACTAGATGAATTTGTTCCTCAAAAAACAAGTGCCTACATTAGCCAAGAAGACCTTCATCAAGGACAAATGACGGTTAGAGAGACATTAGATTTTTCAAGACGTTGTTTAGGTGTTGGATCAAGGTATCAAATGTTGGCAGAAATTTCAAAAAGAGAAAAAGAAGCAGGAATTATGCCAGATCCTGAGATTGATGTGTTCATGAAGGCTATAACATTAGCTGCAGGCAACAAAACTAGTTTGATCACAGAATATGTTCTCAAGATACTTGGATTGGATATTTGCGCTGATGTTGTGGTTGGCTGTGAAATGACAAGGGGCGTTTCTGGTGGACAAAAGAAGCGCGTCACCACAGGGGAGCTGTTGGTAGGACCAGCAAATGTACTCTTAATGGATGAAATATCAACAGGATTGGACAGTTCCACCACTTTTCAGATATGCAAGTTCCTGAGGCAAATGGTTCATATCATGGATATAACCACCGCCATTTCTCTTCTACAGCCAGCACCAGAGACATTTGAACTGTTCGATGACATTATCCTACTTTCAGAAGGTCAAATTGTGTACCAAGGTCCACGTGAGAATGTGCTCGAGTTCTTCGAATGCATGGGTTTCAAGTGTCCTGAAAGAAAAGGAGTAGCTGATTTTTTACAAGAAGTAACATCAAAGAAAGACCAAGAACAATATTGGTATAGAAAAGATGAACCATACAGCTATATTCCAGTTGCTGAGTTTGTGCAATCCTTTAACTCGTTTCCCACAGGAGAGCAACTTAAGAGAGAACTTGGGGTACCCTATGATAAGAGTAGAACACATCCTGCAGCCATAGTGAAACAAAAATATGGTGTACCAAACTGGGAACTATTGAAGGCATGTTTTTCAAGAGAATGGTTGCTTATGAAGCGTAATTCTTTTGTTTACATATTTAAGACAACACAGATAACAATCATGTCTATTTTGGCTTTCACTGTGTTCTTTAGAACAAAAATGCCAGTGGGCAACGTTGAAGATGGGAGAAAATTCTATGGAGCACTATTTTATGGCCTATTTAATATGATGTTTAATGGGATGCCAGAACTAGCCATGACTGTTTTCAGGCTTCCTGTCTTTTTCAAACAGAGAGATCTCATGTTCTATCCTGCATGGGCATTTGGGTTGCCTATGTCGATTCTTCGGATCCCTCTCTCCTTGATGGAATCAGCCATATGGACTATCCTTACATACTATACAATTGGATTTGCCCCTGCAGCTCACAGATTCTTTAGACAATTCTTGGCATTCTTCGCTGTTCATCAGATGGGTATCTCTCTTTTTCGGTTCATGGCTGCAGTTGGTAGAACACAAGTTATGGCTAATATACTAGCATACTTAACCTTGCAACTGGTATTCGTGCTAGGAGGCTATGTTATTGCTAAAGATGATATTGAGTCATGGATAAGATGGGCTTATTACGTTTCTCCTATGACTTATGGTCAGAATGCCATAGTAATAAATGAATTTTTAGATGGAAGATGGAGTAAGCCAAATACAGACCCTAGACATGATGCACCTACAGTTGGAAAATTACTTCTCAAGTCTAGAAGCTTTTACTCAGAAGATTATTGGTTTTGGATATGCATTGGAGCATTGTTTGGGTTTGCTCTTGTTTTCAATCTTATGTTCATTGCTGCGTTGACTTATTTGAATCCTCTCGAAAACGCAAAAGCATTCATCATGGATGAAGGTGACAAGAATGATAAAAAGTCAACCTCTATTCCGCAAACTGTAGCAGATGAAGGAGAATCATCTAATCAGAAACCAAGAACAGGAATGGTTTTGCCATTTCGACCTCTTTCGCTTTCATTCAATCACATGAACTACTATGTAGATATGCCTGCTGAAATGAAAAAGCAAGGAATCCCTGAAGATCGACTTCAACTACTACATAATGTTAGCGGTTCTTTTAGACCAGGCATATTGACAGCACTTGTGGGTGTTAGTGGTGCTGGGAAGACAACCCTCATGGATGTATTGGCTGGAAGGAAAACAGGAGGGTACATTGAAGGAAGTATTAGCATCTCTGGTTACCCAAAGAAACAAGAAACATTTGCTCGTGTTAGCGGTTATTGCGAACAGAATGACATTCATTCTCCTTATGTTACTGTATATGAATCGCTATTATTTTCAGCATGGCTTCGACTTCCTTCAGATGTAAATATCCAAACACGAAAGGTGTTTGTTGAGGAAGTTATGGAGTTGGTTGAGCTTAAATCGATTAGAGGTGCTATAGTAGGCCTTCCAGGCATAGATGGTCTTTCAACTGAACAAAGGAAAAGGCTTACTATTGCTGTAGAATTGGTTGCTAACCCTTCAATTATCTTCATGGATGAACCAACATCTGGGCTTGATGCTAGAGCTGCTGCAATTGTTATGCGAACTGTAAGAAACACAGTAGACACTGGGAGGACAGTTGTGTGCACAATTCACCAGCCAAGCATAGATATCTTTGAAGCTTTTGATGAGCTATTGTTGATGAAAAGAGGAGGACGAGTCATCTATGCTGGACCTCTTGGTCATCAATCAAAAAAGCTGGTAGAATATTTTGAAGCTATTGCAGGGGTTCCAAAAATTAAGGATGGTTATAATCCTGCAACATGGATGCTTGAGATCAGCGCTTCTACAATGGAGGCTCAACTTAATGTAGATTTTGCTGAGGTTTATGCTAACTCCACCCTTTACCAGAGGAACCAGGAAATTATCGAAGAGCTCAGTATTCCAGCACCAGGTTCCGAAGACTTGTTCTTCCCAACAAAATATTCTCAACCGTTTCTTGTACAGTGCAAAGCTTGTTTCTGGAAACAAAACTGGTCCTACTGGAGAAATCCTCAGTATAATGGCACACGATTCTTCATGACATCAATCATGGGAGTAATGTTTGGTTTAATATTTTGGCATGAAGCCAAAAAGACCCACACACAACAAGATTTAATGAATATTTTGGGAGCCATATACGCTTCTGTGATTTTCCTTGGAAACATGAACGCTTCCGGAGTGCAACCAGTTGTTGACATAGAAAGAACTGTCTTGTATCGTGAAAAAGCAGCAGGGATGTATTCTCCATTGTCCTATACATTTGGCCAGGTTGCAATAGAGGCAATTTACAACGTAATTCAAGCGGCTATTTACTCTCTTGTCCTTTTTTCTATGATTGGGTTTGAATGGAAGGCAGGGAAATTCTTTTGGTTCTACTACTATGTAGCAATGTGTTTTATCTACTTCACGTTGTATGGGATGATGGTTGTTGCACTAACCCCAAGCCACCAAATTGCGGCCATTTGTATGTCCTTCTTCATTAGTTTGTGGAACTTGTTCTCTGGCTTCATCATTCCAAGAACGCAAATTCCTATTTGGTGGAGATGGTACTATTGGGCTTCTCCAATTGCATGGACTGTGTATGGCCTTGTTACCTCTCAATTGGGTAACAAAGATGGAGAACTGGTGATCCCAGGAGCACCAAATATGGGCCTTAAGGAATATCTTAAACAGAGCTTGGGTTATCACCATGACTTCCTTCCTGCGGTTGCTGCTGCTCATGTGGGCTGGGCGCTCCTCTTCATGTTCATTTTTGCTTATAGCATCAAATTCTTGAACTTCCAAAAACGATGA 4332 0.4116 MESSLVENAPPISTSSGDRSLSFRETFMAAALGVFSASSRHSHNDDEDELKWAAIERLPTYDRIRKGLLKQVLDDGKVVSHEIDVTKLGFHDKKTLMDTVFKVVEEDNEKFLRRVRDRVDSVGIDVPKIEVRYENLTVEGNVHVGSRALPTLRNTALNFLESIMGMFHFAPSKKKEIQILRNISGIIKPSRMTLLLGPPGAGKTTLLLALAEKLDQELKVSGRITYCGHELDEFVPQKTSAYISQEDLHQGQMTVRETLDFSRRCLGVGSRYQMLAEISKREKEAGIMPDPEIDVFMKAITLAAGNKTSLITEYVLKILGLDICADVVVGCEMTRGVSGGQKKRVTTGELLVGPANVLLMDEISTGLDSSTTFQICKFLRQMVHIMDITTAISLLQPAPETFELFDDIILLSEGQIVYQGPRENVLEFFECMGFKCPERKGVADFLQEVTSKKDQEQYWYRKDEPYSYIPVAEFVQSFNSFPTGEQLKRELGVPYDKSRTHPAAIVKQKYGVPNWELLKACFSREWLLMKRNSFVYIFKTTQITIMSILAFTVFFRTKMPVGNVEDGRKFYGALFYGLFNMMFNGMPELAMTVFRLPVFFKQRDLMFYPAWAFGLPMSILRIPLSLMESAIWTILTYYTIGFAPAAHRFFRQFLAFFAVHQMGISLFRFMAAVGRTQVMANILAYLTLQLVFVLGGYVIAKDDIESWIRWAYYVSPMTYGQNAIVINEFLDGRWSKPNTDPRHDAPTVGKLLLKSRSFYSEDYWFWICIGALFGFALVFNLMFIAALTYLNPLENAKAFIMDEGDKNDKKSTSIPQTVADEGESSNQKPRTGMVLPFRPLSLSFNHMNYYVDMPAEMKKQGIPEDRLQLLHNVSGSFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQETFARVSGYCEQNDIHSPYVTVYESLLFSAWLRLPSDVNIQTRKVFVEEVMELVELKSIRGAIVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYAGPLGHQSKKLVEYFEAIAGVPKIKDGYNPATWMLEISASTMEAQLNVDFAEVYANSTLYQRNQEIIEELSIPAPGSEDLFFPTKYSQPFLVQCKACFWKQNWSYWRNPQYNGTRFFMTSIMGVMFGLIFWHEAKKTHTQQDLMNILGAIYASVIFLGNMNASGVQPVVDIERTVLYREKAAGMYSPLSYTFGQVAIEAIYNVIQAAIYSLVLFSMIGFEWKAGKFFWFYYYVAMCFIYFTLYGMMVVALTPSHQIAAICMSFFISLWNLFSGFIIPRTQIPIWWRWYYWASPIAWTVYGLVTSQLGNKDGELVIPGAPNMGLKEYLKQSLGYHHDFLPAVAAAHVGWALLFMFIFAYSIKFLNFQKR* 1444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0302 1443 Gene3D - 166 468 IPR027417 -
Apr4g0302 1443 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 842 1094 IPR003439 GO:0005524
Apr4g0302 1443 MobiDBLite consensus disorder prediction 811 831 - -
Apr4g0302 1443 Pfam ABC-2 type transporter 1168 1380 IPR013525 GO:0016020|GO:0140359
Apr4g0302 1443 Pfam ABC-2 type transporter 517 729 IPR013525 GO:0016020|GO:0140359
Apr4g0302 1443 Pfam Plant PDR ABC transporter associated 734 800 IPR013581 -
Apr4g0302 1443 Gene3D - 857 1093 IPR027417 -
Apr4g0302 1443 Pfam ABC-transporter N-terminal 93 154 IPR029481 -
Apr4g0302 1443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 438 IPR027417 -
Apr4g0302 1443 Pfam ABC-2 type transporter 396 449 IPR043926 GO:0140359
Apr4g0302 1443 Pfam ABC-2 type transporter 1051 1120 IPR043926 GO:0140359
Apr4g0302 1443 Pfam ABC transporter 870 1022 IPR003439 GO:0005524
Apr4g0302 1443 Pfam ABC transporter 180 363 IPR003439 GO:0005524
Apr4g0302 1443 PANTHER ATP-BINDING CASSETTE TRANSPORTER 19 1443 - -
Apr4g0302 1443 CDD ABCG_PDR_domain1 169 420 IPR034001 -
Apr4g0302 1443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 865 1080 IPR027417 -
Apr4g0302 1443 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 152 438 IPR003439 GO:0005524
Apr4g0302 1443 MobiDBLite consensus disorder prediction 805 831 - -
Apr4g0302 1443 CDD ABCG_PDR_domain2 839 1077 IPR034003 -
Apr4g0302 1443 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 19 1443 - -
Apr4g0302 1443 SMART AAA_5 879 1071 IPR003593 -
Apr4g0302 1443 SMART AAA_5 189 415 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0302 Apr-Chr4 2603548 2614433 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0302 169 427 Calmodulin-binding Proteins AT2G36910 24.060 1.95e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0302 K08711 - gmx:100786482 2276.52