Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0295 ATGGGTCAGAAGTACTTGCACGAGCTACTGAAGGAGGATCAAGAACCGTTCCTTCTAAACAAGTACATTTCCGATAGGCGAAGCCAGATGAAAAGGCCTTCTCCAAACACAAGTTTGCAAGTCAAGAAACGCAAATCAATAAATCAAATTCAAAGCTCAAACTTCTCTGTGAACCTGTGCAAAAATGCTTGTCTTTTCTCCTTCACAGACACCCCAGAGCTCAGAAAATCTCCGCTGTTAGAATTTGCTTCCCCAGCCAAAAGCCCCTGCAAATCACCCAACGCCATTTTTCTTCACATCCCTTCTCGAACTGCAACTCTTCTTCTGGAAGCCGCTCTCAGGATCCACAAACAATCTTCACCCAAAATCAAAACCAAAACCCAATCCTTCGGGCTATTGGGGTCCTTGTTCAAGAGACTAACACAACGAAACCAGAACCGTAAGAGCGAAATAGAGGGTGGAAGCGTAAAGGTCTCGGTGAAGGATGTTTTGAAGTGGGATTCCTCTCTTGGGCGAAGAAAACTCAATGGCAATGGGAGTAGCAAGGAGGAAGAGAAAACAGTGAATGCGTGTGAGGTGGGTGTTTCTTGTTCTTACAATGAAAGGCATAGTAGTGGTGTTTGGTCAGAGAGCAATGGCATGGAAACGTCAAGTAGTGGCCACTCTCATCACTACTTTGTAACCCATCCCAATGACTGTGCTTGCTTCTGTGAAAGCCCTTTCCGTTTTGTTCTTCAAACCAGCACTCCTTCCTCCGGCCACCACACGCCGGAGCTACCCTCGCCGAATCGCCACGCAACACAGGAGAAAGAAAATAATGAAGCAGAGAGTCTCAACAAATTTGAATCAGGGGAAGAAGAGGAAGAAGATAAGGAACAGTGTAGTCCTGTGTGTGTGTTAGACCCACCTTTCGAGGACGATGAGGAAGAGCATGGAAACGACGATGATGAGGAAGACGGTGGTTTTGATTTGGAGTGCAGCTATGCGGTTGTACAGAGAGCTAAGCAGCAGCTATTGTACAAGCTTCGTAGATTTGAGAAACTGGCAGAGTTAGATCCAGTGGAACTTGAGAAAAGAATGCTGGATGAAGAAGAGGAAGGGGATGAAGCATTTATGGAAGAGGATGAGGACAGCGAAGCATCATATAACGAAAATGATTCTAGAGAACTAGTTTTTCAAGCTCTCTCTCAGTCAAGGGTCCATTATGACTTACAGCAAATCCCAGAAGACTTTAAGAAACTGGTTTATGATCTCATTATGGAAGAAGAGAAAGGACTTAATTCCTTAGAAGCTGATAGGGACATGGTGATAAAAAGGATATGCAAGAGGCTGGAGTTGTGGAAAGAAGTAGAGTCCAACACAATTGATATGATGATAGAAGAGGACTTCTCTAGAGAGGATGGTGAGTGGAAGAAAAATGTGGAGCAGATAAGAAATATGGCCGGGGAGCTTGAGATTGCTATATTTGGCTGTTTGGTGGAGGAATTTTCAGAGGAATTAGTATGTTAA 1509 0.4433 MGQKYLHELLKEDQEPFLLNKYISDRRSQMKRPSPNTSLQVKKRKSINQIQSSNFSVNLCKNACLFSFTDTPELRKSPLLEFASPAKSPCKSPNAIFLHIPSRTATLLLEAALRIHKQSSPKIKTKTQSFGLLGSLFKRLTQRNQNRKSEIEGGSVKVSVKDVLKWDSSLGRRKLNGNGSSKEEEKTVNACEVGVSCSYNERHSSGVWSESNGMETSSSGHSHHYFVTHPNDCACFCESPFRFVLQTSTPSSGHHTPELPSPNRHATQEKENNEAESLNKFESGEEEEEDKEQCSPVCVLDPPFEDDEEEHGNDDDEEDGGFDLECSYAVVQRAKQQLLYKLRRFEKLAELDPVELEKRMLDEEEEGDEAFMEEDEDSEASYNENDSRELVFQALSQSRVHYDLQQIPEDFKKLVYDLIMEEEKGLNSLEADRDMVIKRICKRLELWKEVESNTIDMMIEEDFSREDGEWKKNVEQIRNMAGELEIAIFGCLVEEFSEELVC* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0295 502 MobiDBLite consensus disorder prediction 302 322 - -
Apr4g0295 502 MobiDBLite consensus disorder prediction 361 382 - -
Apr4g0295 502 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1B-LIKE PROTEIN 1 502 - -
Apr4g0295 502 MobiDBLite consensus disorder prediction 264 280 - -
Apr4g0295 502 MobiDBLite consensus disorder prediction 248 263 - -
Apr4g0295 502 MobiDBLite consensus disorder prediction 248 322 - -
Apr4g0295 502 MobiDBLite consensus disorder prediction 361 385 - -
Apr4g0295 502 PANTHER OS04G0572500 PROTEIN 1 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0295 Apr-Chr4 2482782 2486162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0295 3 501 TRM (TON1 Recruiting Motif) Superfamily AT2G36420 36.204 3.70e-55 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0295 - - gmx:100790018 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0295 4 2482782 2486162 Apr4g0295 4 2482782 2486162 ECH
Apr4g0295 4 2482782 2486162 Apr8g0596 8 5385031 5388655 PCT