Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0286 ATGGAAATGCCCGCCAGAAGATCCAACTACTCACTTCTCAACCAAACTCCCGACGACCAGTTCGTAGCAGAAGCTTTGCATCTGTCGTTCGACTCCTCCTCCGGCGACAGCAAGAACAACAAGGGAAAGTTTGACAGAGTCTTTGACTGGGACTCCGTCGTCGATCACAGGCTCGCTCAGCAAGGGAATCGGATCGTGAATTTGTACTCTTCGATCGGGTTGCAGAGGCAATCCAGTGAAAACAGTTTCGGCGAGAGCTCGCTGTCCGGCGAGTTCTATGCGCCGACGCTGTCAACCGTCGCGGCCAATGAGATCGACGCCTTCGGCTACGCGCTCCAAGATGGATTCAAAGTCGGCGTCAGTGGTGGCGAGGTCAAAGCCAAGTTTCCGGACACTGCGACGGCGAGGAGTGGAGGGTCTTACGGTAAGAGTTGGGCGCAACAAACGGAGGAGAGTTACCAGTTACAGCTGGCATTGGCTCTTAGGCTTTCTTCGGAGGCCACGTGTGCTGATGATCCCAATTTTCTGGATCCTATGCCTGATGAATCCGTCTTGAGGTCCTCGTCGTCGTGTTTTGCAGAGGCAGTGTCGCATAAATTTTGGGTGAATGGCTGCCTATTATATTTTGACAAAATTCCTGATGGATTTTATCTAATTCACGGGATGGATCCCTATATATGGACTGTGTGCACTGATTTGCTGGAAAATGGACGAATTCCTTCAATTGAGGCGCTAAAGTCTATATATCCCTGTTCTGATTCTTCACTTGAAGTAGTTTTGGTGGACAGACGTGGTGATCCTAACTTAAAAGAACTGGAAAACAGGGTACATAACATTTCTTATAGCTGCTTTACAACAACAGAGGTTGTAGACCAACTTGCGAAGCTGGTTTCCCATTGCATGGGGGGTTCAACTTCTGAATGGGAAGAGGACCTCTTTCCCATATGGAAGAAGTGCATTAAAGATCTGAGAGATTGCTTAGGATCTGTTGTTGTTCCGATTGGCAGTCTATCTACTGGACTTTGCAGGCATCGTGCTATATTATTCAAAGTACTAGCTGATGCCATTGATTTACCGTGTCGAATTGCAAAGGGCTGTAAATATTGTTCTAGAGATGATGCCTCCTCATGTGTTGTTCGATTTGGGCTTGACAGGGAATACATGATTGATCTTATTGGGAAGCCAGGTTGCTTATGCGAGCCTGATTCCTTGCTTAATGGTCCATCTTCCATTTCATTTTCTTCACCCTTGCGCATTCCAAGACTTAAACCAGCTGAACCTACCATTGATTTCAGGTCACTGGCCAAACAATATTTCTCGGATTGTCTGGCTCTTGAGCTTGACTTTGATAGTGGTTCTGCAGAACAGTTTGAAGGGAAGTATAGGGACAGGAACCCTGGGCCAATTCAAAATGATAGTGACAAAAGTTCTTTTGTTCTTCTGCATTCGCAAGCTTATCATCCAAGCATACATGATCAAAGCTCTGGAACATTTAACTCGGTCAACCCTCCTTGGAACGTTGTAGAACTGACTACTACAGGCAAGGATCCATTGCCGTTAAAGCATAACCATCCTGGATTGTTTATTCCTAGCAAACCTAGTAAAGAGCTTGCCCTTCACATGGAGGATTTGGACATACCATGGACTGATCTTGTTTTAAAAGAGAAAATAGGATCAGGTTCTTTTGGAACTGTACATCATGCTGAGTGGAATGGCTCGGAGGTTGCTGTGAAGATTTTGATGGAACAAGACTTCAAAACTGAAAGCTTCAAGGAATTCCTGAGGGAGGTTGTAATAATGAAAGGCTTGCGACATCCAAACATTGTTTTGTTTATGGGTGCAGTCATTAAGCCTCCTAATCTATCAATTGTCACGGAATATTTGTCAAGGGGTAGCTTATATAGGCTGTTGCATAAACCTGGTGCCAGAGAGATGTTGGATGAGAGACGTAGGCTTAGTATGGCTTATGATGTGGCTAAGGGGATGAATTATCTTCATAAACGCAATCCTCCTATTGTTCATAGAGATCTGAAATCTCCAAACCTTCTTGTTGACAAGAAATATACAGTGAAGGTTGGTGATTTTGGGCTTTCCCGACTAAAGGCAAATACATTTCTCTCATCCAAGTCTGCTGCTGGGACTCCTGAGTGGATGGCTCCAGAAGTTCTTCGTAATGAGCCATCCAATGAGAAGTCAGATGTGTACAGCTTTGGTGTCATCTTGTGGGAGCTTGCAACATTGCAACAGCCATGGAGTAATTTGAATCCAGCACAGGTCGTGGCAGCTGTTGGCTTTAAGGGAAAAAGACTTGAGATACCACGTGATTTAAATCCTCAATTAGCCTCAATAATTGAGGCTTGCTGGGCCAATGAACCCTGGAAACGCCCTTCTTTTTCAAGTATTATGGATTCTTTGAAAGTATTGTTCAAACCCCCTACACCTCAACCTAGTCATCCAAACATGCCATTACTTACCTGA 2478 0.4496 MEMPARRSNYSLLNQTPDDQFVAEALHLSFDSSSGDSKNNKGKFDRVFDWDSVVDHRLAQQGNRIVNLYSSIGLQRQSSENSFGESSLSGEFYAPTLSTVAANEIDAFGYALQDGFKVGVSGGEVKAKFPDTATARSGGSYGKSWAQQTEESYQLQLALALRLSSEATCADDPNFLDPMPDESVLRSSSSCFAEAVSHKFWVNGCLLYFDKIPDGFYLIHGMDPYIWTVCTDLLENGRIPSIEALKSIYPCSDSSLEVVLVDRRGDPNLKELENRVHNISYSCFTTTEVVDQLAKLVSHCMGGSTSEWEEDLFPIWKKCIKDLRDCLGSVVVPIGSLSTGLCRHRAILFKVLADAIDLPCRIAKGCKYCSRDDASSCVVRFGLDREYMIDLIGKPGCLCEPDSLLNGPSSISFSSPLRIPRLKPAEPTIDFRSLAKQYFSDCLALELDFDSGSAEQFEGKYRDRNPGPIQNDSDKSSFVLLHSQAYHPSIHDQSSGTFNSVNPPWNVVELTTTGKDPLPLKHNHPGLFIPSKPSKELALHMEDLDIPWTDLVLKEKIGSGSFGTVHHAEWNGSEVAVKILMEQDFKTESFKEFLREVVIMKGLRHPNIVLFMGAVIKPPNLSIVTEYLSRGSLYRLLHKPGAREMLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVGDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRNEPSNEKSDVYSFGVILWELATLQQPWSNLNPAQVVAAVGFKGKRLEIPRDLNPQLASIIEACWANEPWKRPSFSSIMDSLKVLFKPPTPQPSHPNMPLLT* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0286 825 PRINTS Tyrosine kinase catalytic domain signature 625 638 IPR001245 GO:0004672|GO:0006468
Apr4g0286 825 PRINTS Tyrosine kinase catalytic domain signature 666 684 IPR001245 GO:0004672|GO:0006468
Apr4g0286 825 PRINTS Tyrosine kinase catalytic domain signature 713 723 IPR001245 GO:0004672|GO:0006468
Apr4g0286 825 PRINTS Tyrosine kinase catalytic domain signature 732 754 IPR001245 GO:0004672|GO:0006468
Apr4g0286 825 PRINTS Tyrosine kinase catalytic domain signature 776 798 IPR001245 GO:0004672|GO:0006468
Apr4g0286 825 Gene3D Transferase(Phosphotransferase) domain 1 630 813 - -
Apr4g0286 825 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 133 817 - -
Apr4g0286 825 Pfam Protein tyrosine and serine/threonine kinase 552 805 IPR001245 GO:0004672|GO:0006468
Apr4g0286 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 672 684 IPR008271 GO:0004672|GO:0006468
Apr4g0286 825 ProSitePatterns Protein kinases ATP-binding region signature. 557 578 IPR017441 GO:0005524
Apr4g0286 825 CDD STKc_MAP3K-like 557 805 - -
Apr4g0286 825 ProSiteProfiles Protein kinase domain profile. 551 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0286 825 SMART serkin_6 551 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0286 825 Gene3D Phosphorylase Kinase; domain 1 544 629 - -
Apr4g0286 825 SUPERFAMILY Protein kinase-like (PK-like) 528 805 IPR011009 -
Apr4g0286 825 Pfam Ethylene-responsive protein kinase Le-CTR1 193 399 - -
Apr4g0286 825 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 133 817 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0286 Apr-Chr4 2393552 2404862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0286 1 821 MAP Kinase Kinase Kinase AT5G03730 65.089 0.0 967
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Apr4g0286 PK_Tyr_Ser-Thr 2.8e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0286 K14510 - gmx:100787894 1299.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0286 4 2393552 2404862 Apr4g0286 4 2393552 2404862 ECH
Apr4g0286 4 2393552 2404862 Apr8g0970 8 11625144 11650588 PCT