Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0275 ATGGCGTGGTGGCTTTCAGATTATTGTCCTCCGCTCTTTCTCCTATTCTTTTCTTTGTCTTTCCCTCTCTTCCTCTTCTTCCTCATCTTCCGCGGCAAAACCGCCACCTCGAACAGCCACCTCCCACCAGGGCCACCGGGATGGCCTATATTTGGAAACATGTTCCAGCTCGGAGACATGCCTCATCGAACTCTCACACACCTAAGAAACAAGTATGGTCCAATTGTATGGCTTCGTCTAGGCTCCATCAACACCATGGTCATTCTCTCCGCTGATGCTGCCACCGTCTTTTTCAAAAACCATGACCAATCCTTTGCTGATCGAACCATAACTGAAACCATGCGCGTCCATAACTACCACAAATCCTCCTTGGCCTTAGCTCCTTATGGCTCCTACTGGCGCCTCATGCGCCGCCTCGTCACCGTCGACATGCTCGTCGCGAAACGCATAAACGACACCGCCTCCACCCGTCGAAAATGCGTGAACGACATGCTCTCCTGGGTGGCCAAAGAATCTCGAAAATTGGAAGAGGGTCGCGGGCTTCACGTGGCGCGATTCGTTTTCCTCATGACGTTTAACTTGCTTGGGAACTTGATGCTGTCGCGGGACCTTTTCGACCCGGAATCAGAAGTCGTGTCGGAGTTTTTCAACGCAATGATGGGTCTTATGGAGTGGACGGGGCACGCTAACGTCACCGACTTGTTCCCGTGGCTGCGGTGGTTGGACCCGCAGGGTCTCAGGAGAAAGATGCATAGGGACATGGGAAAAGCTCTGGGAATCGCTTCCAGGTTCGTGAAAGAGCGTTTGGAGATGCCGCGTCAGAACATGTCAAGGGACTTCTTGGATGTCTTGCTTGAGTTTCAAAGCAGTGAAAGTCAAGAAGCACTCAACATCTCAGATAAAGACCTCAACATTTTCATATTGGAAATTTTCATGGCTGGGTCAGAAACGTCGAGCAGCACAATTGAATGGGCGATGACGGAGCTTTTGTGCAACCGTGAGTGTCTAGTGAAGGTGAAAAGTGAGCTTAGAGGGGTGGTTGGGTGTGGGAGAGAGGTTGAGGAGAGTGACATAGAGAAGTTGCCGTACCTACAAAGTGTGGTTAAGGAAACACTTCGATTGCATCCTCCGATTCCGTTGCTTGTCCCTCGAAAGGCCACGGAGGACACGGAGTTCATGGGATACCACATACCCAAAGACACGCAGGTTTTCGTGAACGCGTGGGCGATAGGGAGAGACCCAAGCGCGTGGGAGGAGCCTTTGGTTTTCAAGCCCGAAAGGTTTTGTGATGGTAGGAATGTTGATTACAAGGGACAGCACTATGAGTTGATCCCTTTCGGGGCTGGAAGAAGAATGTGTGCCGGTGTGCCGTTGGCCCATAGAGTGCTTCACTTGGTGTTGGGATCGTTGCTTCACCGATTTGATTGGGAACTTGAGAGCCATGTTACGCCATCAACCATAGACACCAAGGACAAGCTCGGCATAACCATGCGTAAGCTTGAACCCTTGCTCGCGGTGCCAAAATTGGTTGCCACTTCATCATGA 1545 0.5126 MAWWLSDYCPPLFLLFFSLSFPLFLFFLIFRGKTATSNSHLPPGPPGWPIFGNMFQLGDMPHRTLTHLRNKYGPIVWLRLGSINTMVILSADAATVFFKNHDQSFADRTITETMRVHNYHKSSLALAPYGSYWRLMRRLVTVDMLVAKRINDTASTRRKCVNDMLSWVAKESRKLEEGRGLHVARFVFLMTFNLLGNLMLSRDLFDPESEVVSEFFNAMMGLMEWTGHANVTDLFPWLRWLDPQGLRRKMHRDMGKALGIASRFVKERLEMPRQNMSRDFLDVLLEFQSSESQEALNISDKDLNIFILEIFMAGSETSSSTIEWAMTELLCNRECLVKVKSELRGVVGCGREVEESDIEKLPYLQSVVKETLRLHPPIPLLVPRKATEDTEFMGYHIPKDTQVFVNAWAIGRDPSAWEEPLVFKPERFCDGRNVDYKGQHYELIPFGAGRRMCAGVPLAHRVLHLVLGSLLHRFDWELESHVTPSTIDTKDKLGITMRKLEPLLAVPKLVATSS* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0275 514 Pfam Cytochrome P450 42 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g0275 514 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 17 510 - -
Apr4g0275 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Apr4g0275 514 Gene3D Cytochrome P450 30 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g0275 514 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g0275 514 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g0275 514 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g0275 514 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g0275 514 PANTHER CYTOCHROME P450 FAMILY PROTEIN 17 510 - -
Apr4g0275 514 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g0275 514 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g0275 514 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g0275 514 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g0275 514 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g0275 514 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g0275 514 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g0275 514 SUPERFAMILY Cytochrome P450 42 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0275 Apr-Chr4 2306915 2308756 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0275 12 507 Cytochrome P450 AT3G52970 44.208 2.78e-143 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0275 K22983 - gmx:100785241 855.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0275 4 2306915 2308756 Apr4g0275 4 2306915 2308756 ECH