Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0274 ATGAACAAGGTTTATCTTTGTCCCATTTTCATAAACTTTGCACTGCCATTGCTCTTGGCCTTGTCCTTCCTCATTGTCACAGAGAGTGCACCCGAGAATGATACACATGCCCTCACCCAATTCCGCCTCCAAACCGACGCTCACGGCTACCTTCTCCCCAACTGGATCGGCGGCGACGCTTGCTCCGCCGCATGGCGCGGCGTGGAATGCTCCCCAAACGGCAGAGTAGTGGGCCTCTCCCTCCCTTCTCTCAATCTCCGAGGTCCAATTGATTCTCTATCACCACTCTCTTACCTACGCTTCCTCGACCTCCACGAAAACCGCTTAAATGGCACCGTTTCACCTCTCTCCAACTGCACCAGCCTCGAACTCCTCTACCTCTCCGGCAACGACTTCTCCGGCGAGATTCCGCCGGAGATATCCTCCCTCAGGCTTCTTCTCCGTCTCGACATCTCCGACAACAACATACGAGGCCCAATCCCCAAACAACTCTCAAAGCTAACTCATCTTCTCACTCTTCGGTTACAAAACAACGTGCTTTCTGGTCAAGTCCCAGATTTTTCTTCTTCACCACTCAACCTCAGCGAACTCAACATGACCAACAACGAACTTCGCGGTCACTTACCCGACGCCATGTTGAAGAAATTCGGCAACGCAAGCTTCTCCGGCAATGATGGCCTATGTGGGTCCACCCCATTACCCAGATGTTCACCCACTGAACCTATTTCTCCTTCTTCTGAAACTACAGAAACCGTTCCTTCAAACCCGAGCTCGTTGCCACAAACAAGTGGTATCATTGCAACAACTCCTCCTAGAAACAAAGGGTTGAGTGCTGGAGTCATTGTAGCAATTGTGGTGGCGGTTTGTGCGGCGGTGCTGGTGGCGGTGTCTTTCGCCGTGGCTCACTGTTGCGCCAGGGGAGGGAGCTCCGGGTCGGTGGTGGGGAGTGAGAGCGGGAAGAGGAAGAGCGGGAGTAGCTACGGAAGCGAGAAGAAGGTGTATGGTAATGGCCATGGCGGTGTTGTGGATAGTGATGGGAGTAATACTGAAACTGAACGAAGCAAGCTTGTGTTTTTCGATAAGAGGAAGCAGTTTGAGTTGGAGGATTTGCTTCGAGCTTCGGCGGAGATGTTGGGGAAAGGGAGTTTGGGGACGGTTTATAGGGCGGTTCTTGATGATGGGTGCACCGTTGCGGTGAAGAGGCTAAAGGATGCGAACCCGTGTGAGAGGAACGAGTTTGAACAGTATATGGATGTTGTTGGGAAGCTTAAGCACCCCAATATTGTTAGACTCAGAGCTTATTACTATGCTAAGGAAGAAAAGCTTCTTGTTTATGATTATCTCCCCAATGGAAGCTTGCATGCTCTTCTTCATGGGAACCGTGGTCCAGGCAGGATTCCATTGGACTGGACGACAAGAATAAGCTTGGTGTTAGGAGCAGGAAGAGGGCTAGCACGAATTCATGCAGAGTACAACGCATCCAAAATACCTCACGGCAACGTCAAATCTTCCAACGTGCTTCTTGACAAAAACGGGGTAGCTTGCATCTCAGACTTCGGTTTGTCACTGCTTCTCAACCCCGTTCACGCCATTGCAAGGTTGGGTGGCTACAAAGCTCCCGAACAAACAGAGTCCAAGAGGCTGTCTCAGGAAGCTGACGTTTACAGTTTTGGAGTGTTACTGTTGGAAGTTCTCACGGGAAGAGCTCCTTCTCCAACACGTAGTGCTCCTCCTCGTCTGGAGTCAGAGGAGCAAGAGGTGGATCTTCCCAAGTGGGTTCGCTCTGTCGTGAAGGAAGAGTGGACTTCCGAGGTGTTTGATGAGGAACTGTTGAGGTATAAGAACATCGAAGAAGAGATGGTGTCCATGCTGCACGTGGGCCTTGCTTGCGTTCTGCCACAGCCTGAGAAGAGACCAACCATGTTGGACGTTGTTAAGATGATTGAGGATATAAGGGTGGAACAATCTCCTCTTGGAGAGGATTATGATGAATCTCGCAATTCACTTTCACCTTCCCTTGCCACCACCGAAGAATGA 2037 0.5091 MNKVYLCPIFINFALPLLLALSFLIVTESAPENDTHALTQFRLQTDAHGYLLPNWIGGDACSAAWRGVECSPNGRVVGLSLPSLNLRGPIDSLSPLSYLRFLDLHENRLNGTVSPLSNCTSLELLYLSGNDFSGEIPPEISSLRLLLRLDISDNNIRGPIPKQLSKLTHLLTLRLQNNVLSGQVPDFSSSPLNLSELNMTNNELRGHLPDAMLKKFGNASFSGNDGLCGSTPLPRCSPTEPISPSSETTETVPSNPSSLPQTSGIIATTPPRNKGLSAGVIVAIVVAVCAAVLVAVSFAVAHCCARGGSSGSVVGSESGKRKSGSSYGSEKKVYGNGHGGVVDSDGSNTETERSKLVFFDKRKQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCERNEFEQYMDVVGKLKHPNIVRLRAYYYAKEEKLLVYDYLPNGSLHALLHGNRGPGRIPLDWTTRISLVLGAGRGLARIHAEYNASKIPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYKAPEQTESKRLSQEADVYSFGVLLLEVLTGRAPSPTRSAPPRLESEEQEVDLPKWVRSVVKEEWTSEVFDEELLRYKNIEEEMVSMLHVGLACVLPQPEKRPTMLDVVKMIEDIRVEQSPLGEDYDESRNSLSPSLATTEE* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0274 678 SUPERFAMILY L domain-like 31 213 - -
Apr4g0274 678 MobiDBLite consensus disorder prediction 307 348 - -
Apr4g0274 678 PANTHER LRR RECEPTOR-LIKE KINASE 1 670 - -
Apr4g0274 678 MobiDBLite consensus disorder prediction 232 266 - -
Apr4g0274 678 CDD STKc_IRAK 378 651 - -
Apr4g0274 678 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 1 670 - -
Apr4g0274 678 Gene3D Phosphorylase Kinase; domain 1 341 447 - -
Apr4g0274 678 Gene3D Transferase(Phosphotransferase) domain 1 448 669 - -
Apr4g0274 678 ProSiteProfiles Protein kinase domain profile. 372 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0274 678 Gene3D Ribonuclease Inhibitor 27 93 IPR032675 -
Apr4g0274 678 Gene3D Ribonuclease Inhibitor 94 242 IPR032675 -
Apr4g0274 678 MobiDBLite consensus disorder prediction 656 678 - -
Apr4g0274 678 MobiDBLite consensus disorder prediction 240 266 - -
Apr4g0274 678 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Apr4g0274 678 SUPERFAMILY Protein kinase-like (PK-like) 376 648 IPR011009 -
Apr4g0274 678 MobiDBLite consensus disorder prediction 662 678 - -
Apr4g0274 678 Pfam Protein kinase domain 376 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0274 Apr-Chr4 2294563 2297330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0274 32 677 Receptor kinase-like Gene Family AT2G36570 66.667 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr4g0274 Pkinase 4.8e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0274 - - gmx:100808402 985.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0274 4 2294563 2297330 Apr4g0274 4 2294563 2297330 ECH
Apr4g0274 4 2294563 2297330 Apr8g0577 8 5175120 5177714 PCT