Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0272 ATGGAACCAAATGCACTAGGTGGTGGAATATTTTCTAACATCAGTAGTGGATTGGTAGGAGTAGAAAACCCTTTACAACAACAACAACAACCAAACCTCCAAAATCAGCAAAACCCTCACCCTTTGCATCATCCTCAAATGGTTTCTTATGCTACCCACCATGACACTGACGCGCATCAGCAATCAATAAAACATGGTTACAACTATTCAGCCACCAAGACCAACAAGCCACAAAGCACCCTCAGTGATGAAGATGAACCTGTGTTCACAGCCGATGACAACAGTTCTGGGGACCCCAAGAGGAAAGTTTCACCATGGCATAGAATGAAGTGGACTGATACCATGGTTAGGCTCTTAATAATGGCGGTTTATTACATTGGAGATGAGGCTGGTTCTGAAGGCACTGATCCCGCAGGGAAGAAGAAAGCCACGGGATTGCTGCAAAAGAAAGGGAAATGGAAATCAGTTTCAAAGGGCATGATGGAGAAAGGTTACTATGTGTCTCCTCAGCAATGTGAAGACAAGTTCAATGATTTGAACAAAAGGTACAAACGGGTCAACGACATTCTAGGCAAGGGAACAGCTTGTAGGGTGGTGGAGAACCAAAGCCTGTTGGATACGATGGATTTGTCACCAAAGATGAAAGAAGAGGTTCGAAAACTACTCAACTCCAAGCACTTGTTCTTCAGGGAAATGTGTGCTTACCATAACAGTTGTGGTCATGGGAGCAACAACAACAATAATGGAGCTTCTAATGTGCAACAATCAGCAGAAGCTGGAACTGAGTCTCAACCACAACATCATCATCATCCACAACAACAACTACATCAGCAGCAACGATGTTTCCATTCATCAGAAAATGGGGTGGGGAGTTTGAGAATGTTGAGAGAGAATGATGATGAGGAAGAGGATGATGACTCAGAGGACTATTCTGATGAGGAGGAAGAGGAATCAGCAGAAGGAGGATCAAGGGGTACTCAAGTAGAGGATGATGAGAATGATGGGATGAGGAAGAGACCAAAGAAGGGAGGGTTTGGTGTATCATCATCTCAGGTTATGCAGCAATTGAGTAGTGAAGCAAATGGTGTGCTGCAAGATGGAGGGAAGAGTCGTTGGGAGAAAAAGCAGTGGATGAAGAAGAGGGTGGTGCAGTTGGAGGAGCAGCAGGTAGACTATCAAGTGCAAGCGTTTGAGTTGGAGAAGCAGCGGTTGAAATGGACCAGGTTTAGCAGCAAGAAGGAGAGGGAAATGGAGAGAGATAAGCTTGAAAATGAAAGGAAAAGGTTGGAAATAGAGAGAATGGTCTTGCTGCTTCGCCACAAGGAGCTTGAATTATTGAATATTCAGCAGCAAAAGCAACAGCATCAGCAGCAACATTCTTCTACCTAG 1389 0.4449 MEPNALGGGIFSNISSGLVGVENPLQQQQQPNLQNQQNPHPLHHPQMVSYATHHDTDAHQQSIKHGYNYSATKTNKPQSTLSDEDEPVFTADDNSSGDPKRKVSPWHRMKWTDTMVRLLIMAVYYIGDEAGSEGTDPAGKKKATGLLQKKGKWKSVSKGMMEKGYYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQSLLDTMDLSPKMKEEVRKLLNSKHLFFREMCAYHNSCGHGSNNNNNGASNVQQSAEAGTESQPQHHHHPQQQLHQQQRCFHSSENGVGSLRMLRENDDEEEDDDSEDYSDEEEEESAEGGSRGTQVEDDENDGMRKRPKKGGFGVSSSQVMQQLSSEANGVLQDGGKSRWEKKQWMKKRVVQLEEQQVDYQVQAFELEKQRLKWTRFSSKKEREMERDKLENERKRLEIERMVLLLRHKELELLNIQQQKQQHQQQHSST* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0272 462 MobiDBLite consensus disorder prediction 293 353 - -
Apr4g0272 462 MobiDBLite consensus disorder prediction 70 85 - -
Apr4g0272 462 MobiDBLite consensus disorder prediction 244 280 - -
Apr4g0272 462 MobiDBLite consensus disorder prediction 70 103 - -
Apr4g0272 462 Gene3D - 111 185 - -
Apr4g0272 462 Coils Coil 412 458 - -
Apr4g0272 462 Coils Coil 382 402 - -
Apr4g0272 462 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 462 - -
Apr4g0272 462 PANTHER F16F4.11 PROTEIN-RELATED 1 462 - -
Apr4g0272 462 MobiDBLite consensus disorder prediction 320 341 - -
Apr4g0272 462 Pfam Myb/SANT-like DNA-binding domain 108 234 IPR044822 -
Apr4g0272 462 MobiDBLite consensus disorder prediction 298 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0272 Apr-Chr4 2279179 2280567 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Apr4g0272 Myb_DNA-bind_4 9.1e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0272 - - aprc:113863792 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0272 4 2279179 2280567 Apr4g0272 4 2279179 2280567 ECH
Apr4g0272 4 2279179 2280567 Apr8g0574 8 5142205 5144337 PCT