Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr4g0262 | ATGTTACTTCCCCTTGTTGTCCATGCAAAAATGATTGCTGAATCAAACATGAGACTCAGCTTCCATTTTCGCTCTGCCTTTCTTCTTTTCCTTGTCCTTGCCCATTACACTGCTTCACAAAAGACTTGTCCAAACTGTGGCTCTATGCAAGTTCCATACCCTTTGAGCACAGAACCAAGTTGTGGTGATCCATACTATAAACTTCGTTGTGATCTTCACGCTCAAAGGCTTTACTTTGACACCCTCAATGGAAGTTCCTATCTTGTGCTCAAAATCATGTCTTCAATCCAACGCATGGTGCTACAGCCACCACCTTGGTTACAAGGTTCATGTGTTACTCAAGACATGCCGAGAAGCAATGGTATTTGGTTAAACCAATCACTCCCTTTCAACATAACTTCATCCAACACAGTGTTTCTTTTTAATTGTTCCCCTCGCCTCTTGGTTTCTCCTCTTAACTGCACTTCTTCTAGTATTTGCCATCGTTACTTGGAGAATTCAGGTCATGTTGATACAAAAAGAGCACTGGAGTGTGCAAGTGGGGGTGGTCTTCACCCTTGTTGCACTTTTCTAGCTGGTGGTATACCTTCAGCTTATAGGATCAGGCTTCACAATTCTGGTTGCAAAGCATTCAGAAGCATCCTTCATTTGGACCAAGAGAAGCCTCCTAATCAGTGGGAAGAAGGCCTTGAAATTCAATGGGCTCCTCCACCTGAACCTGTGTGTAGGACACAAAGGGATTGCTCTAGAGACTCTAAGTGTTCCCCTGCTGGTAGAAATGGCCTATTTCGCTGTCTTTGTAATGGGGGACACCATTGGGACCCTTTTGTAGCAACCTGTGTGAGGTACAAGAGAAAATCAAAATGGAAAACCAGCTTGGTGGTCTCAATAGGGGTTATTGCTTTTTTCTCTCTAGCTGTGGTTCTGGCCATCATCACCAAGTCCTTCAAGCTCTCTAGCCTCAGAGAGAAGCAGGCCAAGGAAAGAGAAGATAAGCTGAAATCAAGTGCTGGGGAGAAACCTTATAGAATGTTTCAACTGAAAGAAGTGAAGAAAGCAACAAATGGTTTTTCCAAAGACAGGATCTTAGGGAGTGGTGGCTTTGGAGAAGTTTACAAAGGTGAATTACAAGATGGAACACTGGTGGCTGTGAAGAAAGCTAGAGTTGGAAACCTTAAAAGCACCCAACAAGTGCTTAATGAGGTTGCAATACTTTCTCAAGTCAATCACAAGAACTTGGTCAGGCTCTTGGGGTGCTGTGTGGAATCTGATCAGCCATTGATGATCTATGAGTATATCTCAAATGGGACCCTCTATGACCATCTTCATGGTAGGTATTCCAACTTTTTAGATTGGAAAACTAGGCTTAAAGTTGCTTTTCAAACTGCTGAAGCATTGGCTTATTTGCATTCTGCTGCACACACTCCCATCTACCATAGAGATGTTAAGTCAACAAATATACTATTGGATGATGAATTCAATGCCAAAGTCTCAGATTTTGGGCTCTCAAGATTGGCTTCCCCAGGACTTAGTCACGTGTCAACATGTGCTCAGGGAACACTTGGGTACTTGGATCCTGAATACTACCGCAACTACCAGTTAACAGATAAAAGTGATGTTTATAGTTATGGGGTTGTGTTGTTAGAGCTTTTGACTTCTCAGAAAGCAATAGACTTCAATCGTGATCAAGATGATGTCAACCTAGCAATTCATGTGACTCAACATGCTAGCAATGGTACAATCGTGGAAGTGGTGGATCAAAGGCTTGTTTCCTTGGAGCCTTCAGGTGATAAAATGAACACAAGCATAAAACTCTTCTTGGAGCTTGCACTTGACTGTCTAAAGGAGAAGAAAGGTGAAAGGCCTAGTATGAGGGACATTGTTCAGCGCTTACTATGCATAATTAGGATTGTAGAACAAGAGTGA | 1926 | 0.4263 | MLLPLVVHAKMIAESNMRLSFHFRSAFLLFLVLAHYTASQKTCPNCGSMQVPYPLSTEPSCGDPYYKLRCDLHAQRLYFDTLNGSSYLVLKIMSSIQRMVLQPPPWLQGSCVTQDMPRSNGIWLNQSLPFNITSSNTVFLFNCSPRLLVSPLNCTSSSICHRYLENSGHVDTKRALECASGGGLHPCCTFLAGGIPSAYRIRLHNSGCKAFRSILHLDQEKPPNQWEEGLEIQWAPPPEPVCRTQRDCSRDSKCSPAGRNGLFRCLCNGGHHWDPFVATCVRYKRKSKWKTSLVVSIGVIAFFSLAVVLAIITKSFKLSSLREKQAKEREDKLKSSAGEKPYRMFQLKEVKKATNGFSKDRILGSGGFGEVYKGELQDGTLVAVKKARVGNLKSTQQVLNEVAILSQVNHKNLVRLLGCCVESDQPLMIYEYISNGTLYDHLHGRYSNFLDWKTRLKVAFQTAEALAYLHSAAHTPIYHRDVKSTNILLDDEFNAKVSDFGLSRLASPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFNRDQDDVNLAIHVTQHASNGTIVEVVDQRLVSLEPSGDKMNTSIKLFLELALDCLKEKKGERPSMRDIVQRLLCIIRIVEQE* | 642 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr4g0262 | 641 | ProSiteProfiles | Protein kinase domain profile. | 357 | 632 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr4g0262 | 641 | SMART | serkin_6 | 357 | 632 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr4g0262 | 641 | Gene3D | Phosphorylase Kinase; domain 1 | 317 | 432 | - | - | |
Apr4g0262 | 641 | CDD | STKc_IRAK | 363 | 631 | - | - | |
Apr4g0262 | 641 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 33 | 641 | IPR045274 | GO:0007166 | |
Apr4g0262 | 641 | ProSitePatterns | Protein kinases ATP-binding region signature. | 363 | 386 | IPR017441 | GO:0005524 | |
Apr4g0262 | 641 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 477 | 489 | IPR008271 | GO:0004672|GO:0006468 | |
Apr4g0262 | 641 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN | 33 | 641 | - | - | |
Apr4g0262 | 641 | Pfam | Protein kinase domain | 358 | 629 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr4g0262 | 641 | Gene3D | Transferase(Phosphotransferase) domain 1 | 433 | 640 | - | - | |
Apr4g0262 | 641 | SUPERFAMILY | Protein kinase-like (PK-like) | 335 | 631 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr4g0262 | Apr-Chr4 | 2206030 | 2208292 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr4g0262 | 38 | 641 | Receptor kinase-like Gene Family | AT5G02070 | 46.361 | 0.0 | 545 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK_LRK10L-1 | Apr4g0262 | Pkinase | 1.3e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr4g0262 | - | - | gmx:100804678 | 1155.58 |