Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0262 ATGTTACTTCCCCTTGTTGTCCATGCAAAAATGATTGCTGAATCAAACATGAGACTCAGCTTCCATTTTCGCTCTGCCTTTCTTCTTTTCCTTGTCCTTGCCCATTACACTGCTTCACAAAAGACTTGTCCAAACTGTGGCTCTATGCAAGTTCCATACCCTTTGAGCACAGAACCAAGTTGTGGTGATCCATACTATAAACTTCGTTGTGATCTTCACGCTCAAAGGCTTTACTTTGACACCCTCAATGGAAGTTCCTATCTTGTGCTCAAAATCATGTCTTCAATCCAACGCATGGTGCTACAGCCACCACCTTGGTTACAAGGTTCATGTGTTACTCAAGACATGCCGAGAAGCAATGGTATTTGGTTAAACCAATCACTCCCTTTCAACATAACTTCATCCAACACAGTGTTTCTTTTTAATTGTTCCCCTCGCCTCTTGGTTTCTCCTCTTAACTGCACTTCTTCTAGTATTTGCCATCGTTACTTGGAGAATTCAGGTCATGTTGATACAAAAAGAGCACTGGAGTGTGCAAGTGGGGGTGGTCTTCACCCTTGTTGCACTTTTCTAGCTGGTGGTATACCTTCAGCTTATAGGATCAGGCTTCACAATTCTGGTTGCAAAGCATTCAGAAGCATCCTTCATTTGGACCAAGAGAAGCCTCCTAATCAGTGGGAAGAAGGCCTTGAAATTCAATGGGCTCCTCCACCTGAACCTGTGTGTAGGACACAAAGGGATTGCTCTAGAGACTCTAAGTGTTCCCCTGCTGGTAGAAATGGCCTATTTCGCTGTCTTTGTAATGGGGGACACCATTGGGACCCTTTTGTAGCAACCTGTGTGAGGTACAAGAGAAAATCAAAATGGAAAACCAGCTTGGTGGTCTCAATAGGGGTTATTGCTTTTTTCTCTCTAGCTGTGGTTCTGGCCATCATCACCAAGTCCTTCAAGCTCTCTAGCCTCAGAGAGAAGCAGGCCAAGGAAAGAGAAGATAAGCTGAAATCAAGTGCTGGGGAGAAACCTTATAGAATGTTTCAACTGAAAGAAGTGAAGAAAGCAACAAATGGTTTTTCCAAAGACAGGATCTTAGGGAGTGGTGGCTTTGGAGAAGTTTACAAAGGTGAATTACAAGATGGAACACTGGTGGCTGTGAAGAAAGCTAGAGTTGGAAACCTTAAAAGCACCCAACAAGTGCTTAATGAGGTTGCAATACTTTCTCAAGTCAATCACAAGAACTTGGTCAGGCTCTTGGGGTGCTGTGTGGAATCTGATCAGCCATTGATGATCTATGAGTATATCTCAAATGGGACCCTCTATGACCATCTTCATGGTAGGTATTCCAACTTTTTAGATTGGAAAACTAGGCTTAAAGTTGCTTTTCAAACTGCTGAAGCATTGGCTTATTTGCATTCTGCTGCACACACTCCCATCTACCATAGAGATGTTAAGTCAACAAATATACTATTGGATGATGAATTCAATGCCAAAGTCTCAGATTTTGGGCTCTCAAGATTGGCTTCCCCAGGACTTAGTCACGTGTCAACATGTGCTCAGGGAACACTTGGGTACTTGGATCCTGAATACTACCGCAACTACCAGTTAACAGATAAAAGTGATGTTTATAGTTATGGGGTTGTGTTGTTAGAGCTTTTGACTTCTCAGAAAGCAATAGACTTCAATCGTGATCAAGATGATGTCAACCTAGCAATTCATGTGACTCAACATGCTAGCAATGGTACAATCGTGGAAGTGGTGGATCAAAGGCTTGTTTCCTTGGAGCCTTCAGGTGATAAAATGAACACAAGCATAAAACTCTTCTTGGAGCTTGCACTTGACTGTCTAAAGGAGAAGAAAGGTGAAAGGCCTAGTATGAGGGACATTGTTCAGCGCTTACTATGCATAATTAGGATTGTAGAACAAGAGTGA 1926 0.4263 MLLPLVVHAKMIAESNMRLSFHFRSAFLLFLVLAHYTASQKTCPNCGSMQVPYPLSTEPSCGDPYYKLRCDLHAQRLYFDTLNGSSYLVLKIMSSIQRMVLQPPPWLQGSCVTQDMPRSNGIWLNQSLPFNITSSNTVFLFNCSPRLLVSPLNCTSSSICHRYLENSGHVDTKRALECASGGGLHPCCTFLAGGIPSAYRIRLHNSGCKAFRSILHLDQEKPPNQWEEGLEIQWAPPPEPVCRTQRDCSRDSKCSPAGRNGLFRCLCNGGHHWDPFVATCVRYKRKSKWKTSLVVSIGVIAFFSLAVVLAIITKSFKLSSLREKQAKEREDKLKSSAGEKPYRMFQLKEVKKATNGFSKDRILGSGGFGEVYKGELQDGTLVAVKKARVGNLKSTQQVLNEVAILSQVNHKNLVRLLGCCVESDQPLMIYEYISNGTLYDHLHGRYSNFLDWKTRLKVAFQTAEALAYLHSAAHTPIYHRDVKSTNILLDDEFNAKVSDFGLSRLASPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFNRDQDDVNLAIHVTQHASNGTIVEVVDQRLVSLEPSGDKMNTSIKLFLELALDCLKEKKGERPSMRDIVQRLLCIIRIVEQE* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0262 641 ProSiteProfiles Protein kinase domain profile. 357 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0262 641 SMART serkin_6 357 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0262 641 Gene3D Phosphorylase Kinase; domain 1 317 432 - -
Apr4g0262 641 CDD STKc_IRAK 363 631 - -
Apr4g0262 641 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 33 641 IPR045274 GO:0007166
Apr4g0262 641 ProSitePatterns Protein kinases ATP-binding region signature. 363 386 IPR017441 GO:0005524
Apr4g0262 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Apr4g0262 641 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 33 641 - -
Apr4g0262 641 Pfam Protein kinase domain 358 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0262 641 Gene3D Transferase(Phosphotransferase) domain 1 433 640 - -
Apr4g0262 641 SUPERFAMILY Protein kinase-like (PK-like) 335 631 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0262 Apr-Chr4 2206030 2208292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0262 38 641 Receptor kinase-like Gene Family AT5G02070 46.361 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Apr4g0262 Pkinase 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0262 - - gmx:100804678 1155.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0262 4 2206030 2208292 Apr4g0262 4 2206030 2208292 ECH