Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0227 ATGGTGGTGGGCGAGTTCACTAGTGTTGGTTTGAGAGCAATGAAGACATCCTTCAGCTACCATGTTCTCACCGGTCGTTGGTTCATGCTATTTGCATCCTTACTAGTCATGGCCGTTGCTGGAGCAACCTACATGTTTGGCATATACTCCAACGAGGTGAAAACCTCTTTGGGCTATGACCAGTCCACACTCAACTTGCTAAGCTTCTTCAAAGACCTCGGTGCCAACGTTGGTGTCATATCGGGGTTGATCAACGAAATAACTCCACCTTGGGTGGTTCTCTCAATTGGGGTCATCATGAACTTCTTTGGCTACTTCATGATATATCTTGCTGTCACTGGCCGCATTGCCAAACCCCAAGTTTGGCAAATGTGTCTCTACATTTGCATAGGTGCAAATTCTCAAACTTTTGCCAACACAGGTGCTTTAGTCACGTGTGTCAAGAACTTCCCAGGAAGCCGGGGTAGTATTCTAGGCCTATTAAAAGGTTATGTTGGTCTAAGTGGTGCCATCATCACACAACTCTACCATGCCTTCTATGGTGATCAAAATCCCCAAGCTCTTATTTTGCTCATTGCTTGGCTCCCCGCAGCGGTTTCCTTCCTTTTCCTTCCAACAATTCGGATATTGAACACTTTACAACAACCTAAGGAGAACAAAGTTTTCTACAACCTTCTATATATTTCACTTGGCCTTGCTGGGTTTCTCATGGTTTTGATTGTTATTCAAAACAAGCTCAGTTTTTCAAGGATTGAGTACATAGCCGATGGCCTTGTGGTTCTTTTCTTTCTTCTTCTCCCACTTGTTGTGGTTTTTAGAGAGGAATTCAACCGTTGGAAGCAAGGAAAAGTGACCGATTCAGTACCCCAATTGAAAGTAGTCACTCAAGTTCCACCTCCAAACGTGGCATCAACCTCTACCACAAGCTCACACGAGAAAAATTCTTGTTTGGGGAGCATACTCAAACCCCCAAATAGAGGAGAAGACTACACCATTTTGCAAGCCTTGTTTAGTATTGACATGCTAATTCTTTTCATTGCAACAACTTTTGGTGTTGGTGGAACATTAACGGCCATAGACAACCTAGGACAAATTGGACACTCCTTGGGATACCCAAGTAAGAGCACTACAACCTTTGTTTCCTTAGTGAGCATATGGAACTACTTGGGACGAGTAGTGTCTGGCTATGTCTCCGAAATTTTCTTAACCAAATACAAATTCCCTCGTCCCTACATGCTCACTCTAGTCATGCTTCTCTCTTGCGTTGGCCATATTCTAATTGCCCTTGGTGTTCCAAACTCTCTCTATTTCGCTTCAGTGATTATTGGGTTTTGTTTTGGAGCTCAATGGCCATTAGTATTTGCAATCATATCAGAAATCTTTGGGCTCAAATACTACTCCACGTTGTACAATTTGGGAGCGGCGGCAAGTCCCGTTGGGTCTTACATTCTAAACGTGAAAGTAACTGGTTCTTTGTATGATAAAGAGGCTTTGAAACAATTGAAGGTCAAAGGGCTCACAAGACAAGCTGGGAAGGACTTGACTTGTGTGGGAGTGCAATGTTATAGAATGGCTTTTATCATAATCACGGCTTCAACGCTGATTGGTTGTTTTGTTTCGTTCATTTTGGTGCTAAGGACAAGAAAATTTTACCAAAGTGATATCTATAGCAAGTTCAGGGCTGAACTTGAAACAGCAGAGAATGAGACGGTGATTACCAAAAGTGGTAATGTTCTGTTTGAAACTGAAGGACACGCTACCACGAGCGGCTCAGAGGATCATGCTAGAAACACTGCAAAGTGA 1803 0.4309 MVVGEFTSVGLRAMKTSFSYHVLTGRWFMLFASLLVMAVAGATYMFGIYSNEVKTSLGYDQSTLNLLSFFKDLGANVGVISGLINEITPPWVVLSIGVIMNFFGYFMIYLAVTGRIAKPQVWQMCLYICIGANSQTFANTGALVTCVKNFPGSRGSILGLLKGYVGLSGAIITQLYHAFYGDQNPQALILLIAWLPAAVSFLFLPTIRILNTLQQPKENKVFYNLLYISLGLAGFLMVLIVIQNKLSFSRIEYIADGLVVLFFLLLPLVVVFREEFNRWKQGKVTDSVPQLKVVTQVPPPNVASTSTTSSHEKNSCLGSILKPPNRGEDYTILQALFSIDMLILFIATTFGVGGTLTAIDNLGQIGHSLGYPSKSTTTFVSLVSIWNYLGRVVSGYVSEIFLTKYKFPRPYMLTLVMLLSCVGHILIALGVPNSLYFASVIIGFCFGAQWPLVFAIISEIFGLKYYSTLYNLGAAASPVGSYILNVKVTGSLYDKEALKQLKVKGLTRQAGKDLTCVGVQCYRMAFIIITASTLIGCFVSFILVLRTRKFYQSDIYSKFRAELETAENETVITKSGNVLFETEGHATTSGSEDHARNTAK* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0227 600 CDD MFS_Mch1p_like 25 537 - -
Apr4g0227 600 Gene3D MFS general substrate transporter like domains 331 552 IPR036259 -
Apr4g0227 600 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 587 - -
Apr4g0227 600 Pfam Nodulin-like 26 272 IPR010658 -
Apr4g0227 600 PANTHER MFS TRANSPORTER 14 587 - -
Apr4g0227 600 SUPERFAMILY MFS general substrate transporter 26 551 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0227 Apr-Chr4 1926916 1929171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0227 17 562 Nodulin-like Gene Family AT2G39210 66.427 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0227 - - gmx:100797779 943.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0227 4 1926916 1929171 Apr8g2592 8 35836782 35839079 ECH
Apr4g0227 4 1926916 1929171 Apr4g0227 4 1926916 1929171 ECH
Apr4g0227 4 1926916 1929171 Apr8g0535 8 4727151 4728911 PCT