Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0212 ATGGGTAAAACATATAGTATTAGTTCTTGGGGATTGTGGAAGGGTGGTTTTGGAGTAGTGGTACCTGTGATGAGGAAACTACACACCACTTTCTCACGTCCAAAAGGGGTGAAGCAAGGCCACTTTGTGGTGATTGCAACTGAAGGGTGGAAACCAGAGCGATTCTTTATTGAATTGGGATATTTGGATCACCCTGATTTTGTGAAGTTGTTAAAGCAAGCTGAAGAAGAGTTTGGGTTCTCTCAGGTAGGAGCACTTGCAATTCCTTGCGAACCAGATGACTTGAAGAGAATCATCGAAAGGAAAAAGAATAGAAACAAGAGTGTTACATGTTGGGTTAAGGGGATTAGAGTTGCATGA 360 0.4222 MGKTYSISSWGLWKGGFGVVVPVMRKLHTTFSRPKGVKQGHFVVIATEGWKPERFFIELGYLDHPDFVKLLKQAEEEFGFSQVGALAIPCEPDDLKRIIERKKNRNKSVTCWVKGIRVA* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0212 119 Pfam Auxin responsive protein 33 100 IPR003676 GO:0009733
Apr4g0212 119 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 12 110 IPR003676 GO:0009733
Apr4g0212 119 PANTHER SMALL AUXIN-UP RNA-RELATED 12 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0212 Apr-Chr4 1772040 1772399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0212 37 108 Calmodulin-binding Proteins AT4G34750 38.667 1.31e-11 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0212 - K14488 gmx:100795119 200.29