Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0206 ATGGTGTTATATGAGCATTCAGATGTTTTTCAATGGGGTCTTAATATTCTTGACGGTGACCCTGCTTATAGTCCTGGATACTATGGCAACATAATTCAACATGATAATGGTGACATCTATAATGGACACTACTTTCATAGCCATTATGGTAATGAATGTAACCATGTAGAGAATGATGAGATCATTGCCCGCACACTTCAAGAAGAGTTTTCACAGCTGGAGATTGCTGAATCTTCAGGATATTTACAGGCAGGTGAAGAGCAGTTCCATGTTTCTGAGACTGAGCCTGCATATGATTGGCATAACTCTTCAATGGTGAACTATTGTTCAGGAGTTCATGATTATACCCAAGAAGGAGTTGGTGATGAAGAACCATCTAGCTCATGTTCAAGTCCTTGTGAAAAAGAGGAATATTCATTAGAGCTAACTGACAGTTATCCACTTGATGATGAAGTAGGGAGGAGATTGAGTCAAATGATACCAATTCCTCATGTTCCAAAAATTAATGGAGAAATTCCTTCAATCGATGAAGCAACTTCAGATCATCAAAGGCTTCTGGATAGATTGCAGTTATATGACTTTGTGGAGCACAAGGTACAAGGTGATGGTAATTGTCAGTTCCGTGCTTTATCTGATCAATTGTATCATGCACCTGATCACCACAAGTTTGTGAGACGACAAATTGTCAATCAGCTCCAATCGAATCCAGACATATATGATGGATATGTTCCCATGGAATATGATGACTACTTGGAGAAGATGTCTAAGAGTGGAGAATGGGGTGATCACGTCACTCTTCAAGCAGCTGCAGATTCATATGGTGTGAGAATATTTGTGATGACTTCTTTCAAGGACACCTGTTGCATAGAGATTCTTCCTCATTTTGAGAAGCCAAAAGGAGTAATTTTCTTGAGTTTTTGGGCAGAGGTGCATTACAACTCCATTTATCCCCAAGGAGATATACCTTCAAGTGAGTCGAGAAAGAAGAAAAGGTGGTGGAACTTTGGGAGCAAACATTAA 1020 0.3951 MVLYEHSDVFQWGLNILDGDPAYSPGYYGNIIQHDNGDIYNGHYFHSHYGNECNHVENDEIIARTLQEEFSQLEIAESSGYLQAGEEQFHVSETEPAYDWHNSSMVNYCSGVHDYTQEGVGDEEPSSSCSSPCEKEEYSLELTDSYPLDDEVGRRLSQMIPIPHVPKINGEIPSIDEATSDHQRLLDRLQLYDFVEHKVQGDGNCQFRALSDQLYHAPDHHKFVRRQIVNQLQSNPDIYDGYVPMEYDDYLEKMSKSGEWGDHVTLQAAADSYGVRIFVMTSFKDTCCIEILPHFEKPKGVIFLSFWAEVHYNSIYPQGDIPSSESRKKKRWWNFGSKH* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0206 339 ProSiteProfiles OTU domain profile. 194 318 IPR003323 -
Apr4g0206 339 SUPERFAMILY Cysteine proteinases 180 318 IPR038765 -
Apr4g0206 339 Gene3D - 175 322 - -
Apr4g0206 339 PANTHER CYSTEINE PROTEINASE SUPERFAMILY PROTEIN 25 335 - -
Apr4g0206 339 Pfam OTU-like cysteine protease 200 286 IPR003323 -
Apr4g0206 339 PANTHER OTU DOMAIN CONTAINING PROTEIN 25 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0206 Apr-Chr4 1722925 1728926 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0206 - - aip:107648617 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0206 4 1722925 1728926 Apr8g1956 8 30177101 30184231 PCT