Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0203 ATGAAGGGTAAGTTTCTAAGGGCATGTCTTAACAAGTGGAAGAAAATGGGTAGTGGAGTAATCCATTGTGGTGGCTACGGTTCCTGTCATTGCTGTGAAATGTGGTCTTGCATGCATGAGAGGGACTCAATTCCCAATGATGTCCCAAAGGGTCACTTGGTTGTATACGTAGGAGAAAACCATAAGAGATATGTCATCAACATCGCATTACTCAATCACCCACTTTTCAAGGCCTTGCTGGATCAAGCTCAAGATGAATACGATTTCATTGCACATTCAAAACTCTATATTCCTTGCAATGAACATCTTTTCCTCACTGTCCTTCGCTCTGCAACCTCTCCATACAAGGAACGTGTGTTTTTGCGCCTATGA 372 0.4274 MKGKFLRACLNKWKKMGSGVIHCGGYGSCHCCEMWSCMHERDSIPNDVPKGHLVVYVGENHKRYVINIALLNHPLFKALLDQAQDEYDFIAHSKLYIPCNEHLFLTVLRSATSPYKERVFLRL* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0203 123 Pfam Auxin responsive protein 38 109 IPR003676 GO:0009733
Apr4g0203 123 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 3 119 - -
Apr4g0203 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 119 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0203 Apr-Chr4 1699370 1699741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0203 46 112 Calmodulin-binding Proteins AT4G34750 47.761 6.69e-18 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0203 K14488 - gmx:100793017 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0203 4 1699370 1699741 Apr4g0203 4 1699370 1699741 ECH