Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0199 ATGGAAGCAACCACCATGACCAATGGCAACCACCAAAGCCAAAACGGTTCCTTTTGCACTTCTACTACTCGCAAGAGCAGTGACCCTTTGAATTGGGGAGTGGCGGCTGAGTCACTAAAGGGAAGCCACTTGGATGAGGTGAAGCGCATGGTGGCGGAATACCGAAAGCCGGCGGTGCGGCTCGGCGGCGAGACACTGACGATTGCTCAGGTGGCTGCCGTCGCCGGCCACGGCGTGACGGTGGAGTTGTCGGAGTCGGCGAGGGATGGCGTTAAGGCGAGTAGTGATTGGGTGATGAATAGTATGAACAACGGCACTGATAGCTACGGCGTCACCACTGGCTTCGGTGCCACGTCACACCGCCGAACCAAACAAGGTGGTGCTTTGCAAAAAGAGCTCATCAGGTTCTTAAATGCTGGAATATTTGGCAATGGAACTGAATCATGCCACACACTGCCATACACAGCAACAAGAGCAGCTATGTTAGTGAGAATCAACACCCTTCTTCAAGGGTACTCAGGCATCAGATTTGAAATCTTGGAAGCCATCACCAAGCTCCTTAACAAGAACATTACTCCATGTTTGCCACTTCGTGGTACAATCACAGCTTCTGGAGATCTTGTTCCTCTTTCTTACATTGCTGGTTTGCTTACTGGAAGACCCAACTCAAAAGCTGTTGGACCCTCTGGAGAAGTGCTTAATGCCAAGGAAGCTTTTCAATTGGCTGGCATCAATTCTGAGTTCTTTGAATTGCAACCCAAGGAAGGTCTTGCCCTTGTTAATGGCACTGCAGTTGGTTCTGCCTTGGCTTCTATGGTTCTCTTTGAGGCTAACATACTAGCTGTGTTGTCTGAAGTTCTTTCAGCTATTTTTGCTGAAGTGATGCAAGGGAAACCTGAATTTACTGATCATTTGACACATAAGTTGAAGCACCATCCTGGTCAAATTGAGGCCGCAGCTATTATGGAGCACATTTTGGATGGAAGTTCTTACATGAAAGCAGCCAAGAAGTTGCATGAGATAGACCCTTTGCAAAAACCAAAACAAGATAGATATGCACTTAGAACTTCCCCACAGTGGCTTGGTCCTCTCATTGAAGTGATTCGTTTCTCAACCAAGTCAATTGAAAGAGAGATTAACTCTGTGAATGACAACCCTTTGATTGATGTGTCAAGGAATAAGGCTTTGCATGGTGGTAATTTCCAAGGAACCCCTATTGGAGTCTCTATGGACAACACACGTTTGGCGCTTGCATCTATTGGTAAACTCATGTTTGCTCAGTTCTCTGAACTTGTCAATGATTTTTACAACAATGGGTTGCCTTCAAATCTCTCTGCTGGTAGAAATCCTAGCTTGGATTATGGTTTCAAGGGAGCTGAAATTGCCATGGCTTCTTATTGCTCTGAACTCCAATATCTTGCAAATCCAGTTACAAGCCATGTCCAAAGTGCTGAGCAACACAACCAGGATGTGAACTCTTTGGGTTTGATCTCATCTAGAAAGACAAATGAAGCTATTGAGATCCTTAAGCTCATGTCTTCCACATTCTTGATTGCACTTTGCCAAGCAATTGACTTAAGGCATTTGGAGGAGAATTTGAAAAACTCAGTCAAGAACATTGTGAGTCAAGTTTCCAAGAAGATTCTCACCACAGGTGTCAATGGAGAACTTCATCCTTCTAGATTTTGTGAAAAAGATTTACTAAAAGTGGTTGATAGGGAATATGTATTTGCTTACATAGACGATCCATGCAGTGCTACATACCCATTGATGCAAAAACTTAGGCAAGTGCTTGTGGACCATGCCTTGGTAAATGCTGACACTGAAAAGAACTTGAACACATCAATCTTTCAAAAGATTGCTACTTTTGAGGATGAGTTGAAGATTCTCTTGCCAAAGGAGGTTGAAAGTGCAAGAGCTGCTTATGAGAGTGGCAATCCAGCAGTTCCAAACAAGATCAAAGAATGCAGATCTTACCCACTATACAAGTTTGTGAGAGAGGATTTGGGAACTGGGTTGTTAACTGGAGAAAAGGTTAGGTCACCAGGTGAAGAGTGTGACAAACTATTCACAGCAATATGCCAGGGTAAAATTATTGATCCACTTCTAGAATGCCTTGGGGAGTGGAATGGTGCTCCTCTTCCAATTTGTTAA 2154 0.4429 MEATTMTNGNHQSQNGSFCTSTTRKSSDPLNWGVAAESLKGSHLDEVKRMVAEYRKPAVRLGGETLTIAQVAAVAGHGVTVELSESARDGVKASSDWVMNSMNNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESCHTLPYTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNKNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEVLNAKEAFQLAGINSEFFELQPKEGLALVNGTAVGSALASMVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSAGRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLIALCQAIDLRHLEENLKNSVKNIVSQVSKKILTTGVNGELHPSRFCEKDLLKVVDREYVFAYIDDPCSATYPLMQKLRQVLVDHALVNADTEKNLNTSIFQKIATFEDELKILLPKEVESARAAYESGNPAVPNKIKECRSYPLYKFVREDLGTGLLTGEKVRSPGEECDKLFTAICQGKIIDPLLECLGEWNGAPLPIC* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0199 717 Gene3D - 19 263 IPR024083 -
Apr4g0199 717 Gene3D Fumarase/aspartase (Central domain) 264 712 - -
Apr4g0199 717 Gene3D - 530 651 IPR023144 -
Apr4g0199 717 SUPERFAMILY L-aspartase-like 28 717 IPR008948 GO:0003824
Apr4g0199 717 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 20 717 - -
Apr4g0199 717 CDD PAL-HAL 64 527 IPR001106 -
Apr4g0199 717 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 28 706 IPR005922 GO:0005737|GO:0006559|GO:0016841
Apr4g0199 717 Pfam Aromatic amino acid lyase 66 543 IPR001106 -
Apr4g0199 717 PANTHER HISTIDINE AMMONIA-LYASE 20 717 IPR001106 -
Apr4g0199 717 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 199 215 IPR022313 GO:0016841
Apr4g0199 717 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0199 Apr-Chr4 1659830 1663673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0199 8 717 Monolignol Biosynthesis Gene Families AT2G37040 81.163 0.0 1238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0199 K10775 - gmx:100787902 1326.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0199 4 1659830 1663673 Apr8g1964 8 30245962 30255874 ECH
Apr4g0199 4 1659830 1663673 Apr4g0199 4 1659830 1663673 ECH