Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0192 ATGGCGTCTAATAGGAGTCAAGGTGGAATTCAACAGTTGCTGGCTGCTGAACAAGAAGCGCAAAGAATTGTCTATGCTGCGAAAAATGAAAAATTGGCTAGGCTGAAACAGGCCAAAGAAGAGGCTGAAAAAGAGATAGCTGAATATCGAGCTCAGTTGGAGTACCAGTTTCAAAAGAAACTGTCAGAGAGTAGTGGGGATTCTGGTGCTAATGTCAAGAGACTTGAGCTAGAGACTGATGCAAAGATCCATCACTTGAAAACTGAGGCTGCAAGAATATCCGGGGATGTTGTCACCATGCTCCTGAAGTATGTTACGAGTGTGAAGAATTAG 333 0.4354 MASNRSQGGIQQLLAAEQEAQRIVYAAKNEKLARLKQAKEEAEKEIAEYRAQLEYQFQKKLSESSGDSGANVKRLELETDAKIHHLKTEAARISGDVVTMLLKYVTSVKN* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0192 110 Coils Coil 25 59 - -
Apr4g0192 110 Gene3D - 1 110 - -
Apr4g0192 110 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 1 110 - -
Apr4g0192 110 Pfam Vacuolar (H+)-ATPase G subunit 6 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Apr4g0192 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
Apr4g0192 110 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 2 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0192 Apr-Chr4 1559878 1561640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0192 8 110 Primary Pumps ATPases(2) AT4G23710 68.932 4.69e-44 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0192 K02152 - gmx:100305477 162.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0192 4 1559878 1561640 Apr4g0192 4 1559878 1561640 ECH