Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0191 ATGAAGATCCCTTGTTGTTTCTCAGCATCGGTCAAAGAACAAACCAAGCAAGAGGAACCAGAAGAACAAAAGGATCAAAATTTTCGCATATTCACTTACAGAGAATTGGATTCTGCCACGCGTGGTTTTCATCCCTCGGAAAAGGTTGGAGAAGGAGGCTTTGGCTCGGTCTATAAGGGGCAGCTTCGGGATGGAACTTGGGTGGCTGTGAAAGTGCTTTCAATTGAACTTGAATCCTTGCAAGGAGAGAAGGAGTTTGTGGCAGAATTGACTACACTATCAAATATCAAGCACCAAAATTTAGTTATTCTTCGAGGGTGTTGTGTAGAAGGAGCTCATAGATATTTAGTCTATGATTACATGGAAAACAATAGCCTTCGTCACACTTTCTTAGGTTCGGAGCAAAGCAGAATGAGATTCACTTGGGAAGCACGAAGGGACATATCCATAGGTGTGGCCAGGGTGCTTGCCTTTCTCCATGAGGAACTTAAACCTCGTATTGTGCACAGAGATATCAAATCTAGCAATGTCCTTCTTGATGATAATTTCACACCGAAAGTTTCAGACTTTGGCTTGGCCAAAATACTAAGGGATGAGAAGTCTTACATCAGTACCCAAGTTGCTGGGACATTGGGTTATCTTGCTCCAGAGTATGCCAGTTCTGGACACTATACCCGAAAATCAGATGTTTATAGCTTTGGAGTACTACTTTTAGAAATTGTCAGTGGTCAACAGGTGGTAGATGCTCATCAACACATGGAACGTTTCATAGTCGAGAGGGCATGGGTAGCGTATGAGGCTAATGATCTTCTGAGAATGGTGGATCCAGTGCTGAATATGAACTTTGCCGAGGAAGAAGCGAAACGGTTTCTATTGGTGGGGCTGCGTTGTGTTCAAGAAACGGCCAAGCATAGGCCACGAATGTCAGAGGTTGTAGATATGTTGTTTAACAATGTTGACATGGAGAACGTTCATATTTCACAACCAGGATTTGTCAACAATCTTAGGAAAGCCAAAAACAGACAGCAGATGCATTCAGCAGAAGAATCAGGTGCTGCTGCGGCAACCTATGGAAGCTCCTCTGTATGGAGTACGGCCAATCTTGCTCGTTAG 1113 0.4367 MKIPCCFSASVKEQTKQEEPEEQKDQNFRIFTYRELDSATRGFHPSEKVGEGGFGSVYKGQLRDGTWVAVKVLSIELESLQGEKEFVAELTTLSNIKHQNLVILRGCCVEGAHRYLVYDYMENNSLRHTFLGSEQSRMRFTWEARRDISIGVARVLAFLHEELKPRIVHRDIKSSNVLLDDNFTPKVSDFGLAKILRDEKSYISTQVAGTLGYLAPEYASSGHYTRKSDVYSFGVLLLEIVSGQQVVDAHQHMERFIVERAWVAYEANDLLRMVDPVLNMNFAEEEAKRFLLVGLRCVQETAKHRPRMSEVVDMLFNNVDMENVHISQPGFVNNLRKAKNRQQMHSAEESGAAAATYGSSSVWSTANLAR* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0191 370 Gene3D Transferase(Phosphotransferase) domain 1 121 328 - -
Apr4g0191 370 ProSiteProfiles Protein kinase domain profile. 43 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0191 370 PANTHER RECEPTOR-LIKE KINASE 6 347 - -
Apr4g0191 370 SMART serkin_6 43 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0191 370 Gene3D Phosphorylase Kinase; domain 1 5 120 - -
Apr4g0191 370 CDD STKc_IRAK 49 315 - -
Apr4g0191 370 Pfam Protein kinase domain 44 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0191 370 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 6 347 - -
Apr4g0191 370 ProSitePatterns Protein kinases ATP-binding region signature. 49 71 IPR017441 GO:0005524
Apr4g0191 370 SUPERFAMILY Protein kinase-like (PK-like) 24 316 IPR011009 -
Apr4g0191 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0191 Apr-Chr4 1556904 1560157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0191 31 334 Receptor kinase-like Gene Family AT1G56120 49.180 5.94e-91 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr4g0191 Pkinase 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0191 - - gmx:100790388 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0191 4 1556904 1560157 Apr4g0191 4 1556904 1560157 ECH