Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0182 ATGGACAAATATCCTAATTCAGAAATCCAACTCCCTCCTGGATTTAGATTCCACCCTTCTGATGAGGAACTAATTGTTCACTATCTGAGAAAAAAAGTGACTTCATCACCCCTTCCTGCTTCATTCATAGCAGAAATAGACCTTTACAAGTATAATCCATGGGAGCTCCCAAGCAAAGCTTTGTTTGGAGAGGATGATGAATGGTACTTCTTTACTCCTAGGGACAGAAAATATCCCAATGGAGTGAGGCCCAATAGAGCAGCTGGTTCAGGTTATTGGAAGGCGACTGGAACTGACAAACCCATTTTCACTTCTTGTGGGATAATAAAGAGCATTGGAGTTAAGAAGGCCCTTGTGTTCTATAAGGGTCGTCCACCAAAAGGATCTAAAACTGATTGGATCATGCATGAGTACAGATTGCATGATTCAATGATCTCAAATTCGAAGCAAAAAGGGTCCATGAGACTTGATGAGTGGGTGCTATGCCGGGTTCGGCAAAAATCTAGCTACTCAAGAAGCATTTGGGAAGATTCAAATGACCTTATTTATGAACCAACCAGTCAGTTTCTACAAATGAATCAGAACTCTAACCCTGAACAAGTCAAAAACACCGTGCACAATGAATTCCCAATGTTACCTTATATTCTGGCTTCTAAGAGTGCTATGCCTAATTCCATTAGTATGGCCTCGAGCTCAGACTTCGATTGTATTGATGATGTAAAAGCATATGCATCATTGCATGAAGATAATTTTAACATAATAGGAGCCCTGGCACCTTTGGCTGAAGGCTTGTTTAGTCCGCAGAAGAGAAAAGCCACTGAAGAAAATGAGTTGGACTTGTATGCTCCCCTCAAACTAAGCAAAGAAGTTGATGATGGGAAGCAAAGAATTGAGATAGAGGGAAGAAAAGGCTACAATTTCAATAACTTTGACCAGTGGAGTTCCATTAAAGAACCCCAAGAGTTTAATAGCTTAGCCTTTATGGGATATACATGA 996 0.4046 MDKYPNSEIQLPPGFRFHPSDEELIVHYLRKKVTSSPLPASFIAEIDLYKYNPWELPSKALFGEDDEWYFFTPRDRKYPNGVRPNRAAGSGYWKATGTDKPIFTSCGIIKSIGVKKALVFYKGRPPKGSKTDWIMHEYRLHDSMISNSKQKGSMRLDEWVLCRVRQKSSYSRSIWEDSNDLIYEPTSQFLQMNQNSNPEQVKNTVHNEFPMLPYILASKSAMPNSISMASSSDFDCIDDVKAYASLHEDNFNIIGALAPLAEGLFSPQKRKATEENELDLYAPLKLSKEVDDGKQRIEIEGRKGYNFNNFDQWSSIKEPQEFNSLAFMGYT* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0182 331 Pfam No apical meristem (NAM) protein 12 140 IPR003441 GO:0003677|GO:0006355
Apr4g0182 331 ProSiteProfiles NAC domain profile. 11 167 IPR003441 GO:0003677|GO:0006355
Apr4g0182 331 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 2 279 - -
Apr4g0182 331 SUPERFAMILY NAC domain 8 167 IPR036093 GO:0003677|GO:0006355
Apr4g0182 331 Gene3D NAC domain 20 171 IPR036093 GO:0003677|GO:0006355
Apr4g0182 331 PANTHER NAC TRANSCRIPTION FACTOR 56 2 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0182 Apr-Chr4 1502479 1503701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0182 10 176 NAC Transcription Factor Family AT1G61110 69.714 1.01e-81 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr4g0182 NAM 5.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0182 - - gmx:100788799 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0182 4 1502479 1503701 Apr4g0182 4 1502479 1503701 ECH