Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0156 ATGGATATTAAGGAAGCAGAAAGGGTGGTCATTGCCAAACCAGTTGCCTCAAGGCCTACTTGTTCTACTTTCAAATCTTTCTCAGAGCTCCTAGCAGGTGCAATCAATGCTTCTCCCGCGATTGCATCTTCTCAAACTACAGTTTCTGCCATTAGACCAAAGACAGTGAGGTTCAAGCCAACAATAAATCGCCCTCCTGCTGGATTTGTTTCTTCTCAGGATGACATTTTTGGAAACTCACTTTGTGATTCTCCTGACAAGACTCCTAAACTTGATACCAAACAGTCACTCATATACAAGCCAACAGCAAAACTCGTGTCAAGAACAACCGTTTCACTTTTAGCAAATATGGGAAATTGCGGTACTAGTCAGCAACAAACACGGCAATCAATGGAGACCAATCTTCAACATTCCATCCATGAAAATATTAGAACCAATATGAGCTCAAATCTTCATCATTGTATTACTCGAAATGCTGAAATAAATCAAACCAGTGAAACTAGTAAGATGGTACAGCAGAACATAGAGGAGGACCAAAAAGCTTTAACATCCTCAACCAATTGTGATCGACCTTCTTATGATGGGTATAATTGGAGGAAATATGGTCAGAAACAAGTAAAAGGAAGCGAGTACCCACGAAGTTATTATAAGTGCACACATCCTAATTGTCCAGTGAAAAAGAAAGTTGAAAGATCATTTGATGGGCAAATAGCAGAAATTGTTTACAAAGGTGAACACAACCATTCAAAGCCACAGCTTCCTAAGCGGAACTCATCAGGGACACAAGGATCAGGAGTGGTGTCTGATGGAATGGTTCAAGATATTTGGAGTAATAATCAAAGTGAGAGGAATGAAGGAAACGAAGAGAGAATTGAGAACACGGGACTTTCTATGCATTCAGATTATCATGTTAAAGCCCCACATCCTAATGATTCTGTTCTAATTGGTGCAACTAATGCTTGTGGAGGAAGCACAGAAAATTCGTGTGGTCTAAGCGGGGAATATGAGGAAGGAAGCAAAGGATTTGAGGCAAATGAAGATGAACCAAGAAGTAAAAGAAGGAAAAATGAGAATCAATCAAATGAAGCAACATTTTCAGAGGATTTAATAGAGCCGCGCATTGTGATGCAAAGTTTTACGGATTCTGAAATACTTGGAGATGGCTTTCGCTGGAGGAAATATGGGCAGAAGGTGGTGAAGGGAAATCCATATCCCAGAAGTTACTATAGATGTACTCATATCAAGTGTAACGTTCGCAAGCACGTAGAGAGAGCAATAGATGACCCAAGGGCATTTGTCACAACATACGAGGGAAAGCACAATCATGAGATGCCACTCAAGAACACAGGAAGCGTGGCCTCCGAAAGAGATTCACAGGCTTCACTTAGTAAAGATAAATCATGA 1404 0.4053 MDIKEAERVVIAKPVASRPTCSTFKSFSELLAGAINASPAIASSQTTVSAIRPKTVRFKPTINRPPAGFVSSQDDIFGNSLCDSPDKTPKLDTKQSLIYKPTAKLVSRTTVSLLANMGNCGTSQQQTRQSMETNLQHSIHENIRTNMSSNLHHCITRNAEINQTSETSKMVQQNIEEDQKALTSSTNCDRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGQIAEIVYKGEHNHSKPQLPKRNSSGTQGSGVVSDGMVQDIWSNNQSERNEGNEERIENTGLSMHSDYHVKAPHPNDSVLIGATNACGGSTENSCGLSGEYEEGSKGFEANEDEPRSKRRKNENQSNEATFSEDLIEPRIVMQSFTDSEILGDGFRWRKYGQKVVKGNPYPRSYYRCTHIKCNVRKHVERAIDDPRAFVTTYEGKHNHEMPLKNTGSVASERDSQASLSKDKS* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0156 467 MobiDBLite consensus disorder prediction 326 367 - -
Apr4g0156 467 MobiDBLite consensus disorder prediction 339 361 - -
Apr4g0156 467 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 7 448 IPR044810 GO:0003700
Apr4g0156 467 SUPERFAMILY WRKY DNA-binding domain 378 445 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr4g0156 467 MobiDBLite consensus disorder prediction 441 467 - -
Apr4g0156 467 SUPERFAMILY WRKY DNA-binding domain 191 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr4g0156 467 SMART WRKY_cls 192 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g0156 467 SMART WRKY_cls 385 444 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g0156 467 MobiDBLite consensus disorder prediction 244 268 - -
Apr4g0156 467 Gene3D WRKY domain 175 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr4g0156 467 Gene3D WRKY domain 371 446 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr4g0156 467 MobiDBLite consensus disorder prediction 253 268 - -
Apr4g0156 467 ProSiteProfiles WRKY domain profile. 194 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g0156 467 Pfam WRKY DNA -binding domain 194 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g0156 467 Pfam WRKY DNA -binding domain 387 443 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g0156 467 ProSiteProfiles WRKY domain profile. 380 445 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g0156 467 PANTHER WRKY TRANSCRIPTION FACTOR 44 7 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0156 Apr-Chr4 1295989 1302794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0156 92 446 WRKY Transcription Factor Family AT2G37260 46.774 1.57e-88 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr4g0156 WRKY 2.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0156 - - gmx:100794069 792.727