Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0155 ATGGGTTGGATTCCCTGTTCTGGAAATTCAGGCACTAAGAAGAAGATTGAAAAGATGGAAGTTCAGGACAGCCTCGTTGGTCAGATCAAAGCCACCCCAGGAAAGTTGAAGAGGAATTCATCCACGAATTCGAAAGATACATCTAAAAATGGGAATCCTGATCACATTGCAGCACAGACATTCTCATTCCGTGAGTTGGCAACTGCAACTAGAAATTTTAGAGCTGAATGTCTTTTGGGTGAGGGCGGCTTTGGCAGAGTATACAAAGGGCGCCTGGAAAGTATTAATCAGGTTGTCGCAATTAAGCAACTTGACCGAAATGGACTGCAAGGGAATAGGGAATTCCTTGTTGAAGTGTTGATGTTAAGTCTACTTCACCATCCCAACCTTGTCAACCTTATTGGCTATTGTGCTGATGGAGATCAAAGACTTCTAGTTTATGAATATATGCCATTAGGATCCTTGGAAGACCACTTGCATGATATTACCCCCGGCAAGAAACAACTGGACTGGAACACACGAATGAAAATAGCTGCTGGAGCAGCAAAGGGATTGGAATATCTACATGACAAAGCTAATCCTCCTGTCATATACCGAGATTTGAAGTGCTCCAACATTTTGCTTGGCGAAGGGTATCACCCAAAGTTATCTGATTTTGGTTTGGCTAAACTTGGCCCAGTTGGGGAAAACACCCATGTATCAACAAGGGTTATGGGCACCTATGGATATTGTGCTCCAGAGTACGCAATGACAGGTCAACTCACTTTGAAGTCCGATGTGTATAGCTTTGGTGTAGTTCTTCTGGAAATAATCACTGGAAGGAAAGCAATTGACAATTCAAAATCTGCAGGAGAGCAGAATCTTGTTGCATGGGCTAGACCCTTATTTAAAGATCGAAGAAAATTTTCACAAATGGCTGATCCAATGCTCCAAGGTCAATATCCTCCAAGAGGGCTATACCAGGCCCTTGCTGTTGCAGCAATGTGTGTTCAGGAGCAGGCTAATATGCGTCCTGTTATAGCTGATGTTGTCACAGCTTTGTCTTATCTTGCTTCACAAAGATATGATCCCAATATGCAGACAGTTCAAAGCTCTCGCCTCGTTCCTGGTACTCCGCCTAGAACTAGGAGGGGGCTATGA 1140 0.4368 MGWIPCSGNSGTKKKIEKMEVQDSLVGQIKATPGKLKRNSSTNSKDTSKNGNPDHIAAQTFSFRELATATRNFRAECLLGEGGFGRVYKGRLESINQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDITPGKKQLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKSAGEQNLVAWARPLFKDRRKFSQMADPMLQGQYPPRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLASQRYDPNMQTVQSSRLVPGTPPRTRRGL* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0155 379 Pfam Protein tyrosine and serine/threonine kinase 77 346 IPR001245 GO:0004672|GO:0006468
Apr4g0155 379 Gene3D Phosphorylase Kinase; domain 1 42 149 - -
Apr4g0155 379 MobiDBLite consensus disorder prediction 34 55 - -
Apr4g0155 379 CDD STKc_IRAK 79 347 - -
Apr4g0155 379 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Apr4g0155 379 ProSiteProfiles Protein kinase domain profile. 73 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0155 379 Gene3D Transferase(Phosphotransferase) domain 1 150 368 - -
Apr4g0155 379 MobiDBLite consensus disorder prediction 32 55 - -
Apr4g0155 379 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL7-RELATED 1 377 - -
Apr4g0155 379 SUPERFAMILY Protein kinase-like (PK-like) 55 347 IPR011009 -
Apr4g0155 379 PANTHER OS07G0668900 PROTEIN 1 377 - -
Apr4g0155 379 SMART serkin_6 73 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0155 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0155 Apr-Chr4 1289245 1292949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0155 33 352 Glycoside Hydrolase AT3G07070 68.750 1.01e-165 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Apr4g0155 PK_Tyr_Ser-Thr 3.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0155 - - gmx:100818024 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0155 4 1289245 1292949 Apr8g0446 8 3792161 3796050 PCT