Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0148 ATGGTTAGATCCTGCTGGAGACCAACTGTAGTGGGTGATGATGATGTGAATGGGAGAGTTGAGGGGTTGCTTTGGTACAAGGATTTGGGGAACCATCTTTATGGGGAATTTTCAATGGCTGTTATTCAAGCTAATAGTTCATTGGAGGATCGTAGCCAACTTGAATCTGGACCCTTGAGTTCTGACTATTTTGGTCCTCAAGGGACCTATGTAGGTGTATATGATGGTCATGGTGGCACTGCGGCCTCTCAGTTCGTCAGTGACAATCTTTTCAGCAATTTCAAGAGTTTTGCAGCTGAACATCAAGGCATCTCAGAAAATGTTATCCGAAGGGCTTTTGCAGCAACAGAAGAGGATTTTCTCTCTGTTGTGAAGAAACAGTGGCTAAGCAAGCCACAGATTGCATCCACGGGTACATGTTGCTTGGCGGGGATAATTTGCAATGGCATGCTATATATTGCTAATGCAGGAGACTCAAGGGCAGTGTTGGGGAGAGCAGAGAGGGCTACAAGGGAAACATCAGCTATTCAATTATCTGCAGAACACAACGTAAACATCCTAACAGAGAGAGATGAACTTCGGTCAAAGCACCCTTATGATTCACAAATCGTGGTTAAGAAACACAATGTTTGGCGTGTGAAAGGCATCATACAGGTTTCACGATCCATAGGTGATGCATATCTGAAGAAAGGCGAGTTTAACAAGGAGCCTCTACCATTGAAGTTTAGACTACCGGAACCATTCTTCAAGCCAATTCTTAGTTATGAACCATCAATATCAATGCATAAACTGCATCCTGACGATCAATTTATCATCTTTGCTTCTGATGGTTTATGGGACCAACTCAGCAACCAAGAGGCCGTCAATATAGTCAGCAACAACCCACGGAATGGAATTGCTAGGAGGCTTGTCAAAGCTGCACTTCGAGAAGCGGCTAGAAAGAGAGAAATGAGATTCTCTGACCTCCAAAAGATTGAACAAGGAGTGAGGAGACACTTCCACGATGATATTACTGTTATTGTTGTATTTCTAAATCCTAAACTCATTGATAATAGCTCCCTCTTGGGTTCTCCTCTTTCAATCAAAGGAGGTGGACCTGCCATTTCTTAG 1110 0.4333 MVRSCWRPTVVGDDDVNGRVEGLLWYKDLGNHLYGEFSMAVIQANSSLEDRSQLESGPLSSDYFGPQGTYVGVYDGHGGTAASQFVSDNLFSNFKSFAAEHQGISENVIRRAFAATEEDFLSVVKKQWLSKPQIASTGTCCLAGIICNGMLYIANAGDSRAVLGRAERATRETSAIQLSAEHNVNILTERDELRSKHPYDSQIVVKKHNVWRVKGIIQVSRSIGDAYLKKGEFNKEPLPLKFRLPEPFFKPILSYEPSISMHKLHPDDQFIIFASDGLWDQLSNQEAVNIVSNNPRNGIARRLVKAALREAARKREMRFSDLQKIEQGVRRHFHDDITVIVVFLNPKLIDNSSLLGSPLSIKGGGPAIS* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0148 369 Pfam Protein phosphatase 2C 69 313 IPR001932 -
Apr4g0148 369 CDD PP2Cc 34 344 IPR001932 -
Apr4g0148 369 SUPERFAMILY PP2C-like 45 345 IPR036457 -
Apr4g0148 369 SMART PP2C_4 30 342 IPR001932 -
Apr4g0148 369 Gene3D - 27 353 IPR036457 -
Apr4g0148 369 ProSitePatterns PPM-type phosphatase domain signature. 70 78 IPR000222 GO:0043169
Apr4g0148 369 PANTHER SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN 3 367 - -
Apr4g0148 369 ProSiteProfiles PPM-type phosphatase domain profile. 33 344 IPR001932 -
Apr4g0148 369 PANTHER ALPHABET, ISOFORM E-RELATED 3 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0148 Apr-Chr4 1255714 1258267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0148 1 365 PP2C-type Phosphatase Gene Family AT3G12620 67.209 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0148 K01102 - gmx:100815902 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0148 4 1255714 1258267 Apr8g0440 8 3738945 3741679 PCT