Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0136 ATGCAAACTCTATATATAACCCACGTCCATTACCAACCATCCAATCTCTCTCTCTCTCTCTCTCTCTCTCACTCAAACACAGTTTGCAGCAACCATTTACTCCAATTGCCGTCTGCAAACTGCGGCAGCTCCTACACATCCAAACGACAAATATTTGGCTATTTTCGTTCAGTTGCAAACATGAGAAACCTCTGTTTTAACCCAAAAACGGCGTCGTTTTCCTTGGCCCGTAATTCTCCTTCTTCGCCGGCGTCCTTAACTTCAATCCCCACGCCACCGCGGTTGAGCTTTTCCAACCCTGGCATCGTCGACGAAGATAGCTACACCATCGAGGAAGCAGAGGCTCTGATCCTGAAATGGAACGCAGACACTTCCGCTTACGCTAACGTCACCTCTCTCTTCTACGAGGACAAAACCGAAGCCAAACAGTACATCAACTGCGTTAACCAGCTTCAGCAGACCATGCATTCCTTGCTCTCACACAATCCTTCCTCTGACAAACTCATCCTCGCTCACAACCTAATGCAGCTGGCTATGAAGAGACTCAAGAAAGAGTTTTACCAGATCTTATCCATGAACAGGGCTCACCTTGATCCCGAATCTGTCTCCGCTAGATCCTCTCGTGGCTCTGTTCATTCCAGCGCCTCCGATTACGACGACGATTTCACGGCGGAAGACGACGACATTCGCGTCGCCGGCGACTCAATCTCCGAAGTCGAACAGGTCTCGTCCGTTGCCATGGCGGATCTCAAGTTGATTGCCGATTGCATGGTCTCGTCCGGTTATGCGAAGGAATGCGTCAGCGTTTACATCATCATCCGAAAATCCATCATCGATGAAGGAATATACCGCCTCGGTGTGGAGAAAATGAGCTCCTCGCGCGTAAACAAGATGGATTGGGAAGTGCTTGATTTGAAGATCAAGAGTTGGTTAGAGGCAGTCAGGATTTCAGTGAGGACGCTCTTCAACGGAGAGAGAATCCTGTGCGACCACGTCTTCAGTTATTCAGATTCCATCAGAGAATCATGCTTCGCTGAAATTTCCAGAGACGGTGCCTCTCTCCTTTTCGGATTCCCTGAACTCGTTGCTAAAACTAAGAAATCGCCGCCAGAGAAGCTGTTCCGCATGCTCGATATGTACGCTCTGATTTCCGAGCTGTGGCCGGAGATTGAGTCCATCTTCTCCTCGGATTACAAAGCCGGAATTCGTTCTCAAGTTCTCGCTTCGCTTCAACGGCTTGCTGAATTCGTGCAAATCTTGCTCATGGAGTTCGAGTCCACGATCCAGAAGGATTCTTCCAAATTGCCGGTGAACGGTGGCGCCGTCCACTCACTCACAGTTCAGACGATGAATTACCTCTCAATCCTCGCCGATTACAGCAACGTTCTCTCTGACATATTCCCGCGCGGGGACTGGCTTCCGCTGCCAAAGATGTCGTCGCTGCCAGAATCTTATTTATACAGTCCTGAATCAGATTACTCGGCGTCGACGCCAGCGTTGACGGCGCGTGTCGCGTGGCTGATTCTCGTCCTCCTTTGCAAGCTCGATGGCAAAGCAAAGCATTGCAAGGACGTTTCGCTGTCTTACCTGTTTCTCGCGAACAATCTCTGGTACGTGGTGGCCAGAGTCCGAAGCTCGAACCTGCAATACGTGCTTGGCGACGATTGGATCACGAAGCATGAAGCTAAAGCGAAAAGGTTCGTCGCGAACTACGAGAAGGTAGCCTGGGGGGAAGTGGTTGCGTCGTTGCCTGAAAATCCAATGCCGGCGGAGGCAAGGGCAGTGTTCGAGAACTTCAACCTCAGATTCGAGGAAGCATATCGGAAACAGAACTCGTTCGTGATAGCTGACCGAGAACTACGAGACGAAATAAAAGGTTCGATCGCGAGAAGTATAGTGCCGAAATATCGCGAATGGTATAATGAGGTGCTCGTTACGGTGGGATCGTTGAGGGACATGACGGCGAAGGAGTATGTGACGTTTACCCCTGAAGATATTGAAAACTACCTCGCTAACCTCTTCTTTTTTGGAACCACCTCCAGTGGTGTCTCGTCGTCGTCGTCGGTGACTTCGTCCCCTTTGCGGCGGTGGAGTTAA 2097 0.5036 MQTLYITHVHYQPSNLSLSLSLSHSNTVCSNHLLQLPSANCGSSYTSKRQIFGYFRSVANMRNLCFNPKTASFSLARNSPSSPASLTSIPTPPRLSFSNPGIVDEDSYTIEEAEALILKWNADTSAYANVTSLFYEDKTEAKQYINCVNQLQQTMHSLLSHNPSSDKLILAHNLMQLAMKRLKKEFYQILSMNRAHLDPESVSARSSRGSVHSSASDYDDDFTAEDDDIRVAGDSISEVEQVSSVAMADLKLIADCMVSSGYAKECVSVYIIIRKSIIDEGIYRLGVEKMSSSRVNKMDWEVLDLKIKSWLEAVRISVRTLFNGERILCDHVFSYSDSIRESCFAEISRDGASLLFGFPELVAKTKKSPPEKLFRMLDMYALISELWPEIESIFSSDYKAGIRSQVLASLQRLAEFVQILLMEFESTIQKDSSKLPVNGGAVHSLTVQTMNYLSILADYSNVLSDIFPRGDWLPLPKMSSLPESYLYSPESDYSASTPALTARVAWLILVLLCKLDGKAKHCKDVSLSYLFLANNLWYVVARVRSSNLQYVLGDDWITKHEAKAKRFVANYEKVAWGEVVASLPENPMPAEARAVFENFNLRFEEAYRKQNSFVIADRELRDEIKGSIARSIVPKYREWYNEVLVTVGSLRDMTAKEYVTFTPEDIENYLANLFFFGTTSSGVSSSSSVTSSPLRRWS* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0136 698 Gene3D Exocyst complex component Exo70 125 681 - -
Apr4g0136 698 Pfam Exo70 exocyst complex subunit 308 671 IPR046364 GO:0000145|GO:0005546|GO:0006887
Apr4g0136 698 PANTHER EXOCYST COMPLEX PROTEIN EXO70 61 681 IPR004140 GO:0000145|GO:0006887
Apr4g0136 698 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 61 681 - -
Apr4g0136 698 SUPERFAMILY Cullin repeat-like 110 674 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0136 Apr-Chr4 1170614 1172976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0136 109 674 EXO70 exocyst subunit family AT3G09520 55.806 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0136 K07195 - gmx:100810548 1021.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0136 4 1170614 1172976 Apr8g0901 8 9949948 9963544 PCT
Apr8g0424 8 3622150 3624000 Apr4g0136 4 1170614 1172976 PCT