Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0133 ATGCTGAGACCCAAAGGCAGCAAGCAGGTTCATAGACATAGAAAACTTCAGAGTTTTCCTTCTGATTCTGGTTCTTGCGGTGGTGGAGTTGCACATGAAGATTCGAACTCATTTCAATTGGGATGGAGATCTTCGAAACAACCGTTTGGAACTCCAGTGAAGAAGTTATTAGCTGAAGAGATGTCCCGAGAAACTGAATCCAAAAGAAGACCTCCTGGTGTCATTGCCAGATTAATGGGTCTTGACGGGCTTCCGTTGCAGTTGCCTGCTATTAAGCATCATAAGGTTTTGTCTGAAAACAATCTAAAAAGGACAACACTGGTGGGGAAAACTCGAAGTAGTGGTACAATATATGGCAGTCGATCATCTAGGAGAAGCTCAAAGAATCAGCAGGAGTTTAAGGATGTCTTTGAGGTCTCAGAGATCCCAAACGTAGAGAGCTGTAGGTATTCGTCACAAGGGTCTGTGCACTTAAAGATCACTGACGATGAAATGTTATTCATTGAACAGAGGTTCATGGATGCCAAGCGCCTTGCAACTTATCAGGATTTACAGTCTTCGCAGGATTCCCATGATACACTTGAGATTCTTGACTCTAACAATGATCATCTGCAAAAATACTTTAAGCGGCCAGATTCTTTGTTTGAAAAGCATTTAGATGATCTGCAAGCTGCCCCTTTACAACCACACTCTGGTCATGTTGAAGCTATGAAATCTTTAGATATAGAGAAATGTGAACATGGTGGCTTCAGCTGGAAGTTGGATAGAGAGACAACAGGGTTGAATTACAATAGATCTCACCATAAGCATCATGATGGGTATTCTTGCCGGTCTGCCAGAAGACATGCAATGCATAGTTCACCAAAATCATCAAAACTTCAGTTTAATGGAAGAGACAAACCTGATGCAGTTCCAACAAAGATTGTAGTATTAAAACCTAATCTTGGAAAAATGCAGAATGCTGCCAAAATTGATTCATCACCTTGTTCTTCACATACTTTTCTGTTAGGGTGTGGAAAGAATGTTGAATTTTCTGATGTCAGATTTAGTAGGGACATTGAACTGAATCAAAAGCAAAAATTGCCTGATACTGCCTGGCATTCAAGGCAAAATTCTTTGGAATCTAGAGAAATTGCAAAGGAGATCACTAGCCAAATGAAAAATAACTTGAATAATGGCTCCATGATATTTTCATCTTCTAGATTTGAAGGATATACTTGGGATGATAGCTCCTGTAGTTTTTCTGGGAACGAATCTCCTGAGGAATCAGAGATAAGTCCTGCAACTTTGGGAAAGTCATTTGACATGAGTAATCTACCACCATCCCATTTTAGTGAATCATCTGTGAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAAATGACGCTCAAGTCTCAACAGAGCCAATCCATCTCCAGGAGCAGTACGTTGGCTGAAATGCTTGCTGTCCCTGACAAGGAAATGAAAAGAACTAATTATGACAGCATTTCTTGTGGGGAAGGTTTACGAGATAAACTTGCTAGAAATGGTAAACCTTCTGGGTGGGTTGAACCATTGGGTATCAGCAGTAGGGATGGTTGGAAGGATGGGTGTATTGGAAGTTTGCCAAGGTCTAAGTCTCTTCCTGCTTCATCTACTACCTTTGGAAGTCCCAGAACAATCTTGCGCCATGAAGCACTTCGTGATGATCGATTTATGATGCCAAAGGAAACCTTTAAACGGGAAAGGAAAAAAGCAGTGAAATGTCTTGATCAAAGACAGCGTATGAATACCAGAAGCTCAAAATCTGGTCACAAGAAGTCTTGGTCTTCTCATTCCTCAAACATAGGAGAGGATGAATCTTCCCCAGACTTAAATACAATTCAACATAAAATGAAGATTTATCTTGAAGAGGATTTATCCAAGCAAGAAGTGCTGGCTGCTGAGATCCTTAGAGATTCAAGTACTGAAGATGTTATGGATGTGGCAAATGAAATAGCAGATGGGTTATCTGACTCTTCTAAAAAGGAGCTATCAGTTGGGTCTTCCAGTAGAAATTCATTCCCTGTTCAACCACCTGTACCTGGTCTTGAATCTTCATGCTGTAAAGATGTGGATCAACCCAGTCCAGTCTCAGTCCTAGAACCTTCTTTTACTGATGATTCATCACCTTATTCGGAATGTTTTGAAAGTCTCAATGTTGACATCCAAGGGCTTCGAATGCAACTCCAGTTGCTGAAGTTGGAATCTGAAGAATATGTGGAAGGATCCGTGCTTACTCCAAGTGATGAAGATGGAGGAGAAGCATCTAATGGAATTTCAGAAGACAACGGATTAGGTAAAACTGAAGATAGCTGGGAGTCTTCCTACATGATTGACGTCTTGTCTGAATCTGGTATAGATAGAGCTCAGCCTGGTGCTTTTTTGGAACTTTGGCATTCTCCGGAATGCCCTGTTAGTCTTTCAGTGTTTGATGAACTTGAAAAGAGGTACTCTGATTGCACTACATGTCCAAGTTCCGAAAGGAGATTGCTTTTTGACCGTATAAATTCAGGAATTATCAATATATACGAGCAATTCATGAGTGCACAGCCATGGGTAGGCCCTACTACAGCGACAAATATTTGTACTAAATTGATTAAAAACGGGCTCCAAGACTCTCTGTACAAAATGCTGGGGTGCCAAGGAAAATTAAAGGATACCGCACTGGGGAAGGTGCTGGTAAGCGAATTGCAGTGGTTGAACTTAAGAGATGACGTTGATGTAATAGCTAGGGAAGTTGAGAGATTGTTGCTAGATGATCTAGTGACAGAGATAGCCAGTACATAG 2814 0.4104 MLRPKGSKQVHRHRKLQSFPSDSGSCGGGVAHEDSNSFQLGWRSSKQPFGTPVKKLLAEEMSRETESKRRPPGVIARLMGLDGLPLQLPAIKHHKVLSENNLKRTTLVGKTRSSGTIYGSRSSRRSSKNQQEFKDVFEVSEIPNVESCRYSSQGSVHLKITDDEMLFIEQRFMDAKRLATYQDLQSSQDSHDTLEILDSNNDHLQKYFKRPDSLFEKHLDDLQAAPLQPHSGHVEAMKSLDIEKCEHGGFSWKLDRETTGLNYNRSHHKHHDGYSCRSARRHAMHSSPKSSKLQFNGRDKPDAVPTKIVVLKPNLGKMQNAAKIDSSPCSSHTFLLGCGKNVEFSDVRFSRDIELNQKQKLPDTAWHSRQNSLESREIAKEITSQMKNNLNNGSMIFSSSRFEGYTWDDSSCSFSGNESPEESEISPATLGKSFDMSNLPPSHFSESSVSREAKKRLSERWKMTLKSQQSQSISRSSTLAEMLAVPDKEMKRTNYDSISCGEGLRDKLARNGKPSGWVEPLGISSRDGWKDGCIGSLPRSKSLPASSTTFGSPRTILRHEALRDDRFMMPKETFKRERKKAVKCLDQRQRMNTRSSKSGHKKSWSSHSSNIGEDESSPDLNTIQHKMKIYLEEDLSKQEVLAAEILRDSSTEDVMDVANEIADGLSDSSKKELSVGSSSRNSFPVQPPVPGLESSCCKDVDQPSPVSVLEPSFTDDSSPYSECFESLNVDIQGLRMQLQLLKLESEEYVEGSVLTPSDEDGGEASNGISEDNGLGKTEDSWESSYMIDVLSESGIDRAQPGAFLELWHSPECPVSLSVFDELEKRYSDCTTCPSSERRLLFDRINSGIINIYEQFMSAQPWVGPTTATNICTKLIKNGLQDSLYKMLGCQGKLKDTALGKVLVSELQWLNLRDDVDVIAREVERLLLDDLVTEIAST* 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0133 937 PANTHER AFADIN 5 936 - -
Apr4g0133 937 MobiDBLite consensus disorder prediction 263 300 - -
Apr4g0133 937 Pfam Domain of unknown function (DUF4378) 783 933 IPR025486 -
Apr4g0133 937 Pfam DUF761-associated sequence motif 65 85 IPR032795 -
Apr4g0133 937 Coils Coil 724 744 - -
Apr4g0133 937 MobiDBLite consensus disorder prediction 670 685 - -
Apr4g0133 937 MobiDBLite consensus disorder prediction 587 619 - -
Apr4g0133 937 MobiDBLite consensus disorder prediction 662 703 - -
Apr4g0133 937 MobiDBLite consensus disorder prediction 753 778 - -
Apr4g0133 937 PANTHER AFADIN 5 936 - -
Apr4g0133 937 Pfam Protein of unknown function (DUF3741) 170 213 IPR022212 -
Apr4g0133 937 MobiDBLite consensus disorder prediction 602 618 - -
Apr4g0133 937 MobiDBLite consensus disorder prediction 1 49 - -
Apr4g0133 937 MobiDBLite consensus disorder prediction 270 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0133 Apr-Chr4 1141636 1147506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0133 48 935 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 37.268 5.71e-143 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0133 - - pvu:PHAVU_001G171300g 1301.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0133 4 1141636 1147506 Apr8g0420 8 3591974 3596935 PCT