Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0131 ATGGAAGACTCCTCCTCTGCTGATTATATCCGCCTGGTGCACCGTTTGATAGAGGAGTGTATCCTATTCAACATGAGCAAAGAAGAATGCATGGAAGCTCTTTCCAAACATGCAAATATCAAGCCAGTTATTACCTCCACTGTTTGGAAGGAGTTAGAGAAGGAGAACAAGGAGTTCTTCGAGGCATACTCGAGGAGCAGAGAAGAGAAAGGTTCAGAGAGAGAGACAAGGCAAAGGATACAAAACATGGTTTCAGATTCTTCCAAAGAAGGAGTTTAG 279 0.4337 MEDSSSADYIRLVHRLIEECILFNMSKEECMEALSKHANIKPVITSTVWKELEKENKEFFEAYSRSREEKGSERETRQRIQNMVSDSSKEGV* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0131 92 PANTHER OS02G0137100 PROTEIN 1 89 IPR006476 -
Apr4g0131 92 MobiDBLite consensus disorder prediction 64 80 - -
Apr4g0131 92 Pfam Plant protein 1589 of unknown function (A_thal_3526) 13 64 IPR006476 -
Apr4g0131 92 TIGRFAM A_thal_3526: uncharacterized plant-specific domain TIGR01589 10 64 IPR006476 -
Apr4g0131 92 MobiDBLite consensus disorder prediction 64 92 - -
Apr4g0131 92 PANTHER ARGININOSUCCINATE LYASE 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0131 Apr-Chr4 1125429 1126867 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0131 - - gmx:100808933 150.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0131 4 1125429 1126867 Apr8g0598 8 5416508 5422867 PCT
Apr8g0418 8 3566491 3567739 Apr4g0131 4 1125429 1126867 PCT