Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0100 ATGGGATCTCGCCAATTAAAGGCACTTATTGTTGATGATGACATGGTGATTCGAATGATTCACCGCAAGATGTTGAGCAGTGCTGGAGTGCAAAATGAAGTTGTGGAAAATGGCAAAGAAGCAGTGGACATTCACCACTCAGGACAAAGTTTTGACCTAATTCTCATGGATAGGGATATGCCCATTATGAATGGCATCGAGGCAACAAAGAAACTTCGATCAATGGGAGTTGATAGCATGATTGCTGGTGTATCTGCGCGCGCTGTGGAAGCACAAGTACGAGAATTTATGGAAGCAGGACTTGATGAATACCTAGAAAAACCTTTGACCCTCTCTAAGCTTACTTCGATCATTAACAAGACTAACGAATCGCATAACTGA 381 0.4252 MGSRQLKALIVDDDMVIRMIHRKMLSSAGVQNEVVENGKEAVDIHHSGQSFDLILMDRDMPIMNGIEATKKLRSMGVDSMIAGVSARAVEAQVREFMEAGLDEYLEKPLTLSKLTSIINKTNESHN* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0100 126 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 124 - -
Apr4g0100 126 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 3 124 - -
Apr4g0100 126 CDD REC_hyHK_CKI1_RcsC-like 9 118 - -
Apr4g0100 126 Gene3D - 2 126 - -
Apr4g0100 126 ProSiteProfiles Response regulatory domain profile. 7 122 IPR001789 GO:0000160
Apr4g0100 126 Pfam Response regulator receiver domain 9 118 IPR001789 GO:0000160
Apr4g0100 126 SUPERFAMILY CheY-like 5 122 IPR011006 -
Apr4g0100 126 SMART REC_2 6 118 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0100 Apr-Chr4 905797 906344 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0100 6 119 Response Regulator Gene Family AT3G04280 47.414 1.76e-29 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr4g0100 Response_reg 4.4e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0100 - - gmx:100819813 164.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0100 4 905797 906344 Apr4g0100 4 905797 906344 ECH