Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0093 ATGGAGAACGTGTTTCGCTTAGTGGATCACGAAGAGTTCTTCTCACGTCGTTGCATTTGGGTTAATGGCCCAGTGATCGTAGGAGCAGGCCCATCAGGGCTTGCCACAGCAGCATGTCTTAGAGAACAAGGGGTACCCTTCATGGTTCTCGAAAGAGCAGATTGCATAGCTTCACTGTGGCAAAAACGCACTTATGACAGGTTAAAGCTTCACCTTCCAAAGCAATTTTGCCAGCTTCCAAAACTTCCTTTCCCTGAAGATTTCCCTGAATACCCAACAAAGAAACAGTTCATAGAGTACTTAGAATCATACGCAAAGCACTTTGAGATCAACCCACAGTTCAACGAGTGCGTTCAGTCAGCAAGGTACGATGAGACAAGTGGGTTCTGGCGTGTTAAGACTGTTTCTTCTTTGAGTGGCTTAACCCGAAACGAGGTTGAGTATATTTGCAGGTGGCTCGTTGTTGCCACTGGCGAAAATGCTGAGTGTGTTATGCCTAATGTCGAAGGGTTGAGTGAGTTCAAAGGTGATGTTATTCACGCTTGCGAGTATAAGTCAGGGGAAACGTTAAAGGGAAAGAAGGTTCTTGTTGTTGGGTGTGGAAATTCTGGCATGGAACTCTCTCTTGATCTTTGCAACCACCATGCTTCACCATCCATGGTTGTTCGTAGCTCGGTTCATGTGTTACCGAGAGAGATCTTTGGCAAATCAACGTTTGAGTTGGCTGTTATGATGCTGAAATGGTTGCCTCTTTGGCTTGTTGACAAGATTATCTTGTTGTTGGCGTGGTTTGTTATAGGGAACATAGAGAAGTTTGGGCTGAAAAGGCCTTCAACGGGTCCTTTGGAGCTGAAGAACACAAAGGGGAAGACCCCGGTTTTGGACATTGGTGCCTTGGAGAAAATCAGATCTGGTGAAATCAAAGTGGTGCCAGGAATCAAGAGGTTTAACAATGGTGAGGTTGAGCTTGATAATGGTGAAAAGCTTGAGGTTGATGCAGTGGTGCTTGCTACTGGTTACCGCAGCAATGTCCCTTCTTGGCTTCAGGAAGGTGAATTTTTCTCCAAGAATGGATACCCAAAGATGCCATTTCCTCATGGTTGGAAAGGAAATGCTGGGCTCTATGCTGTTGGGTTCACAAAGAGAGGGCTCTCTGGTGCTTCATCTGATGCTGTGAATATTGCTCAAGATATTGGCAAAGTGTGGAAACAAGAGACTAAGCAAAAGAAACAGCGTACTACTGCTTGTCATAGACGTTGCATTTCCCAATTCTAA 1275 0.4525 MENVFRLVDHEEFFSRRCIWVNGPVIVGAGPSGLATAACLREQGVPFMVLERADCIASLWQKRTYDRLKLHLPKQFCQLPKLPFPEDFPEYPTKKQFIEYLESYAKHFEINPQFNECVQSARYDETSGFWRVKTVSSLSGLTRNEVEYICRWLVVATGENAECVMPNVEGLSEFKGDVIHACEYKSGETLKGKKVLVVGCGNSGMELSLDLCNHHASPSMVVRSSVHVLPREIFGKSTFELAVMMLKWLPLWLVDKIILLLAWFVIGNIEKFGLKRPSTGPLELKNTKGKTPVLDIGALEKIRSGEIKVVPGIKRFNNGEVELDNGEKLEVDAVVLATGYRSNVPSWLQEGEFFSKNGYPKMPFPHGWKGNAGLYAVGFTKRGLSGASSDAVNIAQDIGKVWKQETKQKKQRTTACHRRCISQF* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0093 424 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Apr4g0093 424 PRINTS Pyridine nucleotide disulphide reductase class-II signature 190 214 - -
Apr4g0093 424 Pfam Flavin-binding monooxygenase-like 26 345 IPR020946 GO:0004499|GO:0050660|GO:0050661
Apr4g0093 424 SUPERFAMILY FAD/NAD(P)-binding domain 25 303 IPR036188 -
Apr4g0093 424 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED 10 422 - -
Apr4g0093 424 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Apr4g0093 424 PRINTS FAD-dependent pyridine nucleotide reductase signature 194 212 - -
Apr4g0093 424 Gene3D - 24 404 IPR036188 -
Apr4g0093 424 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 10 422 - -
Apr4g0093 424 SUPERFAMILY FAD/NAD(P)-binding domain 191 399 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0093 Apr-Chr4 833211 834978 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0093 K11816 - gmx:100819987 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0093 4 833211 834978 Apr4g0093 4 833211 834978 ECH
Apr8g0384 8 3260417 3264571 Apr4g0093 4 833211 834978 PCT
Apr8g1491 8 23867665 23877110 Apr4g0093 4 833211 834978 PCT