Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0092 ATGGCTGCTGCTGCTAATCCTGTAGTTGGGTCTCATATTTGGGTGGAGGATCCTGACATGGCTTGGATAGATGGTGAGGTCTTGGAGGTTAATGGAGAAGAAATCAAAGTCATTTGCACTTCAGGGAAGAGGGTTGTTGTAAAAGCTTCCGGTATTTATCATAAAGATACCGAAGTCCCACCAAGTGGAGTGGATGATATGACAAAGCTTGCTTACCTGCATGAACCTGGAGTCCTGGATAATTTGAGATCAAGATATGATATCAATGAAATTTATACTTACACTGGGAATATATTGATTTCTGTGAACCCTTTTATAAAGCTCCCTCATTTATATGATAGCCATATGATGGCACAATATAAAGGAGCTGCTTTTGGTGAGCTAAGTCCACATCCCTTTGCAGTTGCTGATGCAGCATATAGGCTTATGATAAATGAGGGAATCAGCCAGTCAATATTGGTTAGTGGGGAAAGTGGAGCTGGTAAAACAGAAAGTACTAAGTTACTCATGCGGTATCTTGCTTACATGGGAGGGAGAGCTGCTGCTGAAGGTAGAACTGTTGAGCAAAAGGTCCTGGAGTCCAATCCTGTTCTAGAAGCCTTTGGCAATGCAAAGACTGTTAGGAACAATAATTCAAGTCGTTTTGGTAAGTTTGTAGAGATTCAATTTGACCAGAGGGGAAGAATTTCAGGAGCTGCCATCAGAACTTATCTGCTTGAAAGATCACGTGTTTGCCAAGTGTCAGATCCAGAGAGGAACTATCATTGTTTCTACATGCTCTGTGCTGCACCTCCACAGGATGTTAAGAAGTTCAAATTAGGAAATCCAAGAACGTTTCATTATCTGAATCAGTCAAATTGCTTTGAGTTGGAAGGGATTGATGAATCTAAAGAATATATGGCTACAAGGAGAGCAATGGATATTGTTGGAATAAGTTCTGAGGAGCAGGATGCAATATTCCAAGTTATTGCTGCAATTTTGCATCTTGGCAACATTGAATTTGCAAAAGGGAAGGAGATAGATTCATCTGTTCCCAAAGATGAAAAATCATGGTTCCATCTACAGACTGCATCTGAGCTTTTCATGTGTGATGCCAAGGCACTTGAAGATTCTCTTTGCAAACGTGTAATTGTTACTCGCGATGAAATAATTACAAAATGGCTGGATCCGGAAGCTGCTGCACTCAGTCGAGATGCTTTGGCTAAGATTGTATACACAAGATTGTTTGACTGGTTGGTTGATAAAATTAATAATTCCATCGGTCAAGATCCTGAGTCAAAATCCATAATTGGCGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGACTAACAGTTTTGAGCAATTTTGTATTAATTTGACCAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTCAAAATGGAGCAAGAAGAATACAAAAAAGAGGAAATTGATTGGAGTTACATTGAATTTGTGGACAATCAAGATATTTTGGATCTCATTGAAAAGAAACCTGGTGGCATTATTGCTCTTCTGGATGAAGCTTGTATGTTTCCTAGATCAACAAATGAAACTTTCGCCCAAAAGCTGTATCAGACCTTCAAAAACCATAAAAGGTTCAGCAAGCCTAAATTATCACGCAGTGACTTCACAATTTGCCATTATGCTGGAGATGTCACTTATCAAACTGAATTGTTCCTTGACAAGAACAAAGATTATGTTGTTGCAGAACACCAGGCACTTCTTTATGCTTCCAAATGCCCTTTTGTGTCGGGCTTGTTTACCCCTTCACCTGAGGAGTCTTCCAAACAATCAAAGTTCTCTTCAATAGGTTCACGATTTAAGCAACAATTGCAAGCTTTACTTGAAATACTCAGTGCCACTGAGCCTCATTACATTCGTTGTGTGAAACCCAATAATCTTCTTAAGCCAGCAATTTTTGAGAATAAAAATGTTTTGCTGCAACTACGTTGTGGGGGTGTTATGGAGGCAATTAGGATAAGCTGTGCTGGGTATCCCACTAGAAAAACCTTTGATGAATTTGTAGATCGATTTGGCCTTCTTGCTCCTGAAGCATTGGATGGAAGTTCTGATGAAGTCACTGCTTGCAAGAGGATTCTAAAGAATGTTGGACTTGAAGGCTATCAGATTGGTAAGTCAAAGGTTTTTCTTCGAGCCGGTCAGATGGCAGAACTAGATACCCGTAGAAGTGAGATCTTAGGAAAGTCAGCCAGCATTATTCAGAGGAAAGTTCGCTCCTATTTGGCCCGCCAAAGTTTCATCTCACTTCGTTTGTCTGCTACACAGATTCAAGCTGTGTGCAGAGGACAACTTGCCCGGCAAGTTTACGAGGGAATGCGGCAGGAGGCTTCCAGTATGGTGATTCAGAGGTGCTTCCGCATGCACATTGCCAGGAAGGCATACAAAGAATTGTATACTTCTGCTATCTCTATTCAGACTGGTATGCGGGGGATGGCTGCTCGTTGTGAACTAAACTTTAGAAGGCAGACTATAGCAGCGATTGGCATTCAGAGCCATTTCCGGAAATACTTGGCATGGCATCATTTCACAAAGTTAAAGAAGGCAGCAATTACAACACAATGTGCATGGAGAGGGAAAGTTGCACGGCGAGAATTACGAAAGCTCAAAATGGCTGCAAGAGAAACAGGAGCTCTCCAAGCTGCCAAAAATAAGCTTGAAAAGCAAGTTGAAGACCTTACATTAAGGTTGCAGCTGGAAAAACGTTTGAGGGTTGACATGGAAGAAGCAAAAGCACAAGAAAATCAAAGATTACAATCTGCTTTGCAAAAGATGCAACTTCAGTTTAAAGAAACCAAAATACTACTTGAAAAAGAGCGGGAGGCTACAAAAAGAGTTGCAGAGAGAGAGCCTGTCATACAGGAGGTTCCAGTTGTTGACCATGCTTTGTTGGAGAAGCTCAATAGTGAGAATGAGAAACTCAAGAACTTGGTGAGTTCACTGGAAAAGAAAATTGATGAAACTGAAAAAAGGTATGAAGAGGCAAACAGAATTGGGGAAGAAAGGTTGAAGCAGGCTGTGGATGCAGAATCAAAAATAGTCCAGTTGAAGACTGCTATGCAAAGGCTCGAAGAGAAATTCATAGACATGGAATCTGCAAACCATATTCTTCAGAAACAATCTCAACTAAACTCATCTGTGAAAACAATAGCAGAGCACTTATCTTCCCCAGTAGCTGAGAAGTTAGAAAATGGTCACCATGTGGCAGAAGAGCAGAAAGACGTTGATACATGTGTTACCCCTGTGAAACAATTTGGTACAGAATCTGACTCTATTTTGAGGAGATCTTACATTGAACGTCAACATGAGAGTGTTGATTTACTTGTCAGCTGTGTTATGAAAAATCTTGGCTTCAATCATGGAAAACCCATTGCTGCATTCACCATTTACAAATGTCTCATCCACTGGAAATCATTTGAAGCCGAAAGAACTAGTGTATTTGATCGCCTTATCCAGATGATTGGTTCTGAAATTGAGAATCAAGATGGCAATGATCATATGGCCTACTGGCTTTCAAATACATCTGCATTATTGTTTTTACTTGAACAAAGCCTGAATTCTGGGAGTTCAACAAATGCAACTCCAGTTAGAAAACCACCTAATCCAACATCCCTCTTTGGAAGAATGACTATGGGTTTTCTTTCATCTCCTTCTTCTGCCAACCTTGCTGCCCCTCCCCCAGAGGTTGTACGCAAGGTAGAGGCTAAATATCCCGCTTTACTTTTCAAGCAGCAGCTCACAGCCTATCTGGAGAAAATATATGGCATCATTAGGGATAATTTGAAGAAGGAGTTAACATCAGTGCTCGCGTTATGTATTCAGGCACCAAGATCATCAAAGGGAGTGTTACGACCTGGCCGATCCTTTGCAAAAGATTCACCAATGGTTCACTGGCAGAGTATTATTGAATCCCTCAATACCCTTCTCTGTACACTGAAAGAGAACTTTGTGCCTCAAGTTCTTATCCAAAAGATTTTCAGTCAAACATTCTCATATATTAATGTACAACTCTTCAATAGTCTTCTGCTCCGTCGCGATTGTTGCACCTTCAGCAATGGGGAATATGTGAAGGCTGGATTAGCTGAACTAGAGCTGTGGTGCTGCCAAGCAAAGGAGGAGTACGCAGGGTCATCTTGGGATGAGCTTAAGCACATAAGACAGGCTGTTGGATTCTTGGTTATTCATCAGAAGTATAGGATTTCTTATGATGAAATCATCAATGATTTATGCCCTATCCTAAGTGTTCAGCAGCTGTATAGAATATGTACACTTTACTGGGATGGTAACTACAATACTCGAAGTGTATCTCCAGATGTTCTTTCAAGCATGAGGATGCTTATGGCTGAGGACTCCAATAATGCTCAGAGTGATTCTTTCTTGTTGGATGACAGCTCCAGCATTCCCTTCTCAGTGGATGATCTCTCTACATCAATGCAAGAGAAGGACTTCTCAGACATGAAACCAGCTGATGAACTTCTTGAGAATCCAGCCTTCCAATTTTTAAATGAGTAG 4536 0.4076 MAAAANPVVGSHIWVEDPDMAWIDGEVLEVNGEEIKVICTSGKRVVVKASGIYHKDTEVPPSGVDDMTKLAYLHEPGVLDNLRSRYDINEIYTYTGNILISVNPFIKLPHLYDSHMMAQYKGAAFGELSPHPFAVADAAYRLMINEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRAAAEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPQDVKKFKLGNPRTFHYLNQSNCFELEGIDESKEYMATRRAMDIVGISSEEQDAIFQVIAAILHLGNIEFAKGKEIDSSVPKDEKSWFHLQTASELFMCDAKALEDSLCKRVIVTRDEIITKWLDPEAAALSRDALAKIVYTRLFDWLVDKINNSIGQDPESKSIIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTNETFAQKLYQTFKNHKRFSKPKLSRSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLYASKCPFVSGLFTPSPEESSKQSKFSSIGSRFKQQLQALLEILSATEPHYIRCVKPNNLLKPAIFENKNVLLQLRCGGVMEAIRISCAGYPTRKTFDEFVDRFGLLAPEALDGSSDEVTACKRILKNVGLEGYQIGKSKVFLRAGQMAELDTRRSEILGKSASIIQRKVRSYLARQSFISLRLSATQIQAVCRGQLARQVYEGMRQEASSMVIQRCFRMHIARKAYKELYTSAISIQTGMRGMAARCELNFRRQTIAAIGIQSHFRKYLAWHHFTKLKKAAITTQCAWRGKVARRELRKLKMAARETGALQAAKNKLEKQVEDLTLRLQLEKRLRVDMEEAKAQENQRLQSALQKMQLQFKETKILLEKEREATKRVAEREPVIQEVPVVDHALLEKLNSENEKLKNLVSSLEKKIDETEKRYEEANRIGEERLKQAVDAESKIVQLKTAMQRLEEKFIDMESANHILQKQSQLNSSVKTIAEHLSSPVAEKLENGHHVAEEQKDVDTCVTPVKQFGTESDSILRRSYIERQHESVDLLVSCVMKNLGFNHGKPIAAFTIYKCLIHWKSFEAERTSVFDRLIQMIGSEIENQDGNDHMAYWLSNTSALLFLLEQSLNSGSSTNATPVRKPPNPTSLFGRMTMGFLSSPSSANLAAPPPEVVRKVEAKYPALLFKQQLTAYLEKIYGIIRDNLKKELTSVLALCIQAPRSSKGVLRPGRSFAKDSPMVHWQSIIESLNTLLCTLKENFVPQVLIQKIFSQTFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPILSVQQLYRICTLYWDGNYNTRSVSPDVLSSMRMLMAEDSNNAQSDSFLLDDSSSIPFSVDDLSTSMQEKDFSDMKPADELLENPAFQFLNE* 1512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0092 1511 ProSiteProfiles IQ motif profile. 737 764 IPR000048 GO:0005515
Apr4g0092 1511 Coils Coil 972 1006 - -
Apr4g0092 1511 Gene3D - 785 833 - -
Apr4g0092 1511 Gene3D - 834 882 - -
Apr4g0092 1511 Gene3D - 735 784 - -
Apr4g0092 1511 CDD MYSc_Myo11 76 720 IPR036018 -
Apr4g0092 1511 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr4g0092 1511 Gene3D - 666 733 - -
Apr4g0092 1511 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Apr4g0092 1511 PANTHER MYOSIN 6 1509 - -
Apr4g0092 1511 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Apr4g0092 1511 Gene3D - 252 310 - -
Apr4g0092 1511 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Apr4g0092 1511 SMART iq_5 805 827 IPR000048 GO:0005515
Apr4g0092 1511 SMART iq_5 853 875 IPR000048 GO:0005515
Apr4g0092 1511 SMART iq_5 757 779 IPR000048 GO:0005515
Apr4g0092 1511 SMART iq_5 830 852 IPR000048 GO:0005515
Apr4g0092 1511 SMART iq_5 782 804 IPR000048 GO:0005515
Apr4g0092 1511 SMART iq_5 734 756 IPR000048 GO:0005515
Apr4g0092 1511 ProSiteProfiles IQ motif profile. 831 860 IPR000048 GO:0005515
Apr4g0092 1511 Gene3D - 439 623 - -
Apr4g0092 1511 Gene3D Kinesin motor domain 65 662 IPR036961 -
Apr4g0092 1511 SMART DIL_2 1332 1439 IPR002710 -
Apr4g0092 1511 Coils Coil 1014 1048 - -
Apr4g0092 1511 Pfam DIL domain 1333 1435 IPR002710 -
Apr4g0092 1511 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr4g0092 1511 SMART MYSc_2a 56 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr4g0092 1511 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Apr4g0092 1511 Pfam IQ calmodulin-binding motif 761 778 IPR000048 GO:0005515
Apr4g0092 1511 Pfam IQ calmodulin-binding motif 856 875 IPR000048 GO:0005515
Apr4g0092 1511 Pfam IQ calmodulin-binding motif 786 804 IPR000048 GO:0005515
Apr4g0092 1511 Pfam IQ calmodulin-binding motif 737 755 IPR000048 GO:0005515
Apr4g0092 1511 Pfam IQ calmodulin-binding motif 834 847 IPR000048 GO:0005515
Apr4g0092 1511 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Apr4g0092 1511 Pfam Myosin N-terminal SH3-like domain 10 50 IPR004009 GO:0003774|GO:0005524|GO:0016459
Apr4g0092 1511 ProSiteProfiles Dilute domain profile. 1156 1457 IPR002710 -
Apr4g0092 1511 Coils Coil 877 950 - -
Apr4g0092 1511 CDD MyosinXI_CBD 1107 1480 IPR037975 GO:0007015
Apr4g0092 1511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 785 IPR027417 -
Apr4g0092 1511 PANTHER MYOSIN-14 6 1509 - -
Apr4g0092 1511 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Apr4g0092 1511 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr4g0092 1511 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr4g0092 1511 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr4g0092 1511 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr4g0092 1511 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr4g0092 1511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 787 883 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0092 Apr-Chr4 796349 813123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0092 1 1510 Myosins gene family AT5G43900 74.983 0.0 2350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0092 K10357 - gmx:100795648 2771.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0092 4 796349 813123 Apr4g0092 4 796349 813123 ECH
Apr4g0092 4 796349 813123 Apr8g0383 8 3222311 3242501 PCT