Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0082 ATGGTTACTTACACTTGCTCCGCCGCCGACCTCCGCCCTCTTCTCGGCGGAGGAGGCAACGCCACCGCCGCAGCCGAATACTTATGTGGTCGTTTTGATGCCATATCAAACAAGTTTGTTGACACATCTTATGCGGTTGACAACACTTACCTTCTCTTCTCTGCGTACCTTGTCTTTGCCATGCAACTTGGGTTTGCCATGCTTTGTGCTGGTTCAGTTCGTGCCAAGAACACCATGAACATCATGCTCACCAATGTTCTCGATGCTGCTACTGGTGGGATTTTCTTTTACATCTTTGGCTTTGCTTTTGCATTTGGTACACCTTCAAATGGTTTCATTGGGAAACACTTCTTTGGCCTTGAAGAGTTTCCTTCAGTTTCTTTTGACTATGGTTACTTTCTCTTTCAATGGGCTTTTGCCATTGCTGCTGCTGGGATCACGAGTGGTTCCATAGCTGAGAGGACACAGTTTGTCGCTTATTTGATATACTCATTGTTTTTGACTGGTTTTGTGTACCCAATTGTGGCACATTGGTTTTGGTCTCCTGATGGGTGGGGTAGTCCTGCTAGAGCTGAGAATTTGTTGTTTGGATCTGGGGTTATTGATTTTGCTGGTTCTGGTGTTGTTCATTTGGTTGGAGCTATTGCTGGATTGTGGGGTGCTTTCATTGAAGGTCCTAGAATTGGGAGGTTTGATCATGCAGGGAAACCTGTGCCAATGAGAGGGCACAGTGGTACTTTGGTGGTTTTGGGGACATTCATGTTGTGGTTTGGTTGGTATGGATTCAATCCTGGTTCGTTTCTTAATATCTTGAAGGCTTATGGAGGGAGAGGTTCTTATTATGGGCAATGGAGTGCTATTGGGAGGACTGGAGTGACCACAACTTTATCTGGATGTGCAGCAGCATTGGCTACCCTCTTTGGAAAACGCATGCAAACTGGGCATTGGAATGTCACAGATGTTTGCAATGGTTTGCTTGGTGGGTTTGCTGCTATCACTGCAGGGTGTTCTGTGGTGGATCCTTGGGCTGCAATCATATGTGGATTTGTGGCTGCTTGGGTGCTTATTGGATGCAACTTGCTGGCAGAGAAATTGAAGTATGATGATCCACTTGAGGCTGCACAACTTCATGGTGGTTGTGGCACTTGGGGGATCATTTTCACTGCTTTGTTTGCTAAGAAAGAGTACGTGAATGAGGTGTACCCAGGGTTCCCTAATAGGCCTTATGGGCTGTTTATGGGAGGGGGTGGCAAGCTCTTGGCAGCAAATCTTGTTCAGATTTTGGCAATCATCGGTTGGGTGAGTGTCACAATGGGAACAATGTTCTTTCTGTTGCATAAACTGAATCTGCTGAGGATATCACATGATGAGGAGATGGCTGGGTTGGATTTAACCCACCATGGTGGATTGGCTTATGAGTATCATGAAAGCGTGGAACATATACAGAAACGTGAAGTTGGAGCAACTGTTTGA 1473 0.4603 MVTYTCSAADLRPLLGGGGNATAAAEYLCGRFDAISNKFVDTSYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGIFFYIFGFAFAFGTPSNGFIGKHFFGLEEFPSVSFDYGYFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSLFLTGFVYPIVAHWFWSPDGWGSPARAENLLFGSGVIDFAGSGVVHLVGAIAGLWGAFIEGPRIGRFDHAGKPVPMRGHSGTLVVLGTFMLWFGWYGFNPGSFLNILKAYGGRGSYYGQWSAIGRTGVTTTLSGCAAALATLFGKRMQTGHWNVTDVCNGLLGGFAAITAGCSVVDPWAAIICGFVAAWVLIGCNLLAEKLKYDDPLEAAQLHGGCGTWGIIFTALFAKKEYVNEVYPGFPNRPYGLFMGGGGKLLAANLVQILAIIGWVSVTMGTMFFLLHKLNLLRISHDEEMAGLDLTHHGGLAYEYHESVEHIQKREVGATV* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0082 490 Pfam Ammonium Transporter Family 50 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Apr4g0082 490 Gene3D Ammonium transporter AmtB like domains 29 488 IPR029020 -
Apr4g0082 490 PANTHER AMMONIUM TRANSPORTER 2 486 - -
Apr4g0082 490 TIGRFAM amt: ammonium transporter 47 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Apr4g0082 490 PANTHER AMMONIUM TRANSPORTER 2 486 - -
Apr4g0082 490 ProSitePatterns Ammonium transporters signature. 202 227 IPR018047 GO:0008519|GO:0016020|GO:0072488
Apr4g0082 490 SUPERFAMILY Ammonium transporter 44 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0082 Apr-Chr4 714242 715714 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0082 5 486 Inorganic Solute Cotransporters AT4G13510 73.868 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0082 K03320 - cit:102629580 809.29