Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0081 ATGGAAGTTGAAGTTAAGTACAAAGACAAAGGCAAAGGTGTAATGTACCCAGAAAGTTCAGGAACAATAACAGCACTTGTTGTAGATGACGAGAAGACCGTCAGAATGATTCATCAAAAGTTGTTGAACAGAATTGGGGTGAAAAATCACGCAGTGGAAAATGGCAAAGAAGCTGTGGACATTCATAACACTGGTAAAAGGTTTGACCTAATTCTTATGGATTGGGACATGCCAGTCATGGATGGAGTAGAGGCAACGAAGAAACTTCGTTCAATGGGGATTCGTAACGTGATTATTGGTGTGTCATCATGCCCTACAATGAAAATACAAGAATTTATGGATGCGGGGCTAGATGACTTCTACATGAAACCTTTCAACATTCGTATGCTTAATGATATTGTTAATAAGATGCAGTCATGCCGATCCAACTGGGCAACGGATGCAATTCAAGCTAGCAAGTAG 462 0.4026 MEVEVKYKDKGKGVMYPESSGTITALVVDDEKTVRMIHQKLLNRIGVKNHAVENGKEAVDIHNTGKRFDLILMDWDMPVMDGVEATKKLRSMGIRNVIIGVSSCPTMKIQEFMDAGLDDFYMKPFNIRMLNDIVNKMQSCRSNWATDAIQASK* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0081 153 ProSiteProfiles Response regulatory domain profile. 24 138 IPR001789 GO:0000160
Apr4g0081 153 SMART REC_2 23 134 IPR001789 GO:0000160
Apr4g0081 153 Gene3D - 8 145 - -
Apr4g0081 153 Pfam Response regulator receiver domain 26 134 IPR001789 GO:0000160
Apr4g0081 153 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 19 139 - -
Apr4g0081 153 CDD REC_hyHK_CKI1_RcsC-like 26 134 - -
Apr4g0081 153 SUPERFAMILY CheY-like 23 139 IPR011006 -
Apr4g0081 153 PANTHER TWO-COMPONENT RESPONSE REGULATOR 19 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0081 Apr-Chr4 711858 712474 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0081 23 126 Response Regulator Gene Family AT3G04280 42.056 2.06e-21 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr4g0081 Response_reg 1.5e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0081 - - aprc:113860782 310.457