Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0072 ATGGAATCCAAAATTCAACTCTTTTTCCTCACCCTTTTTCTCCTCATTCTCACCATCCATGCTGGAACTCTTGCTACTTACATAGTTCAGTTACATCCTCATGGCACAACCAGTTCTTCCTTCACCTCCAAGCTGAAATGGCACCTTTCATTCATACAGCAAACTGTTTCCTCTGATGAGGACCCTTCTTCACGCCTCCTCTACTCTTACCATTCAGCCATGGATGGTTTTGCAGCTCAGCTAACTGAGTCTGAGCTTGAGTACCTTAAAAACTTACCTGATGTTATCTCAGTTAGGCCTGATAAACAGCTTCAGATTCAGACCACTTATTCTTACAAATTCTTGGGACTCAACCCTACAAGAGAAAATGGTTGGTATCAATCCGGATTTGGCCATGGAACCATAATTGGGGTGCTCGATACTGGAGTGTGGCCAGAGAGTCCTAGCTTCAATGATCATGGAATGCCTCCAGTTCCCAAGAAATGGAAGGGTATATGCCAATCTGGCAAGGACTTTAACTCTTCCAATTGTAATAGAAAACTCATTGGTGCAAGGTACTTTACCAAAGGCCATCTAGCAGTGTCACCTACCAGAATTAGAGAATATTTATCTCCTAGAGACTCATCTGGACATGGCACACACACTTCATCCACTGCTGGTGGAGTGCCGGTGCAGTCGGCTAGTGTGTTCGGCTATGCGGCAGGCGTGGCGAGAGGAATGGCTCCTGGTGCCCACATTGCAGTGTACAAAGTCTGCTGGTTCAATGGCTGCTATAACTCTGACATCATGGCTGCAATGGATATGGCAATCAGAGATGGTGTGGACATTCTCTCATTGTCTCTAGGTGGCTTTCCAGTGCCTCTATATGATGATAGTATTGCCATTGGAAGCTTTAGAGCAATGGAGCATGGGATTTCAGTTGTTTGTGCAGCAGGAAATAATGGCCCAACAGAAATGTCTGTTGCCAATGAAGCTCCTTGGATTGCCACTGTTGGTGCTAGCACACTAGACAGGAAATTCCCAGCTATAGTGCACATGGGAAATGGGCAAGTTCTCTATGGAGAATCCATGTACCCATTGACCCATCCAATGAACAATGGCAAAGAGCTTGAGGTGGTTTATGTGGCTGATGTGGACACTGAGAGTCAATTTTGCCTCAGAGGGTCTCTTCCAAGGGACAAGGTTAAGGGTAAAATGGTGGTCTGTGACAGAGGTGTCAATGGAAGAGCAGAAAAGGGTCAGGTGGTGAAGGAAGCAGGTGGTGTTGCTATGATATTGGCGAACACAGAGATAAACTTGGAAGAGGATTCAGTTGATGTTCATGTCTTGCCTGCAACCTTGGTAGGATTTGATGAATCAGTCACCTTGAAAGCTTATATAAACTCCACAAGTAGGCCTCTTGCTAGAATTGAATTTGGAGGAACTGTGATAGGGAAGTCTAGAGCCCCAGCAGTGGCAAGATTTTCAGCCAGAGGACCAAGTTTTACAATCCCTTCAATCCTCAAACCAGATGTTATAGCTCCAGGAGTCAACATCATTGCTGCATGGCCTCAGAATCTTGGTCCTACAGGCCTTCCAGAGGATTCTAGGCGTGTCAACTTCTCTGTTATGTCTGGTACCTCAATGGCATGCCCTCATGTTAGTGGAATTGCTGCTCTCATTCGTTCAGCTCACCCAAAATGGTCCCCTGCAGCCATCAAATCTGCAATCATGACAACATCCGAGGTAACTGACCACACAGGAAGACCAATTCTTGATGAAGATAAACCAGCTGGAGTTTTTGCAATGGGATCTGGACATGTGAATCCACCAAGAGCATTGAATCCAGGACTTGTATATGACATCAGGCCAAATGATTATATCACGCACCTTTGCAGCCTTGGATATACAAAGTCAGAAATATTCATCATAACACATAGAAATGTGAGTTGCAATGCAATCATGCAGATGAATAGAGGCTTTAGCCTTAACTATCCCTCATTCTCAGTGATTTTTAAGGATGGAATGAGGAGAAAGATGTTCAGCAGGAGGGTAACAAATGTGGGAAGTCCTAACTCCATCTACTCGGTGGAGGTTATAGCACCTGAAGGAGTAAAAGTGATAGTGAAACCCAAGAGGTTGGTTTTTACACAAGTAAATCAAAGCTTGAGTTATAGGGTATGGTTTATATCAAGAAAAAAGGCTAAAAAGGGAGATTTCACGAGCTTTGCTGAAGGGCATTTGGCATGGGTACACTCACAAAACGGTTCTTACAGGGTTAGAAGCCCAATAGCAGTGACTTGGAACTCTAAGTAG 2295 0.4458 MESKIQLFFLTLFLLILTIHAGTLATYIVQLHPHGTTSSSFTSKLKWHLSFIQQTVSSDEDPSSRLLYSYHSAMDGFAAQLTESELEYLKNLPDVISVRPDKQLQIQTTYSYKFLGLNPTRENGWYQSGFGHGTIIGVLDTGVWPESPSFNDHGMPPVPKKWKGICQSGKDFNSSNCNRKLIGARYFTKGHLAVSPTRIREYLSPRDSSGHGTHTSSTAGGVPVQSASVFGYAAGVARGMAPGAHIAVYKVCWFNGCYNSDIMAAMDMAIRDGVDILSLSLGGFPVPLYDDSIAIGSFRAMEHGISVVCAAGNNGPTEMSVANEAPWIATVGASTLDRKFPAIVHMGNGQVLYGESMYPLTHPMNNGKELEVVYVADVDTESQFCLRGSLPRDKVKGKMVVCDRGVNGRAEKGQVVKEAGGVAMILANTEINLEEDSVDVHVLPATLVGFDESVTLKAYINSTSRPLARIEFGGTVIGKSRAPAVARFSARGPSFTIPSILKPDVIAPGVNIIAAWPQNLGPTGLPEDSRRVNFSVMSGTSMACPHVSGIAALIRSAHPKWSPAAIKSAIMTTSEVTDHTGRPILDEDKPAGVFAMGSGHVNPPRALNPGLVYDIRPNDYITHLCSLGYTKSEIFIITHRNVSCNAIMQMNRGFSLNYPSFSVIFKDGMRRKMFSRRVTNVGSPNSIYSVEVIAPEGVKVIVKPKRLVFTQVNQSLSYRVWFISRKKAKKGDFTSFAEGHLAWVHSQNGSYRVRSPIAVTWNSK* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0072 764 Gene3D - 337 477 - -
Apr4g0072 764 Pfam Peptidase inhibitor I9 26 106 IPR010259 -
Apr4g0072 764 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Apr4g0072 764 PRINTS Subtilisin serine protease family (S8) signature 207 220 IPR015500 -
Apr4g0072 764 PRINTS Subtilisin serine protease family (S8) signature 538 554 IPR015500 -
Apr4g0072 764 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.2 21 761 - -
Apr4g0072 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 539 549 IPR023828 -
Apr4g0072 764 Pfam Subtilase family 131 577 IPR000209 GO:0006508|GO:0008236
Apr4g0072 764 Gene3D Peptidase S8/S53 domain 133 620 IPR036852 GO:0004252|GO:0006508
Apr4g0072 764 SUPERFAMILY Subtilisin-like 107 611 IPR036852 GO:0004252|GO:0006508
Apr4g0072 764 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 761 IPR045051 -
Apr4g0072 764 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 107 IPR037045 -
Apr4g0072 764 Gene3D - 624 761 - -
Apr4g0072 764 ProSiteProfiles Serine proteases, subtilase domain profile. 109 607 - -
Apr4g0072 764 CDD PA_subtilisin_like 344 470 - -
Apr4g0072 764 CDD Peptidases_S8_3 104 574 IPR034197 -
Apr4g0072 764 Pfam PA domain 371 452 IPR003137 -
Apr4g0072 764 SUPERFAMILY Protease propeptides/inhibitors 49 106 - -
Apr4g0072 764 Pfam Fibronectin type-III domain 656 759 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0072 Apr-Chr4 614883 617177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0072 1 760 Subtilisin-like Serine Gene Family AT1G04110 68.264 0.0 1099
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0072 - - gmx:100790205 1365.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0072 4 614883 617177 Apr4g0072 4 614883 617177 ECH