Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0071 ATGAAGAAGAACAAGATGAAAATGAAAAAGTTTTTCATCTTTTTCAGTTACATTAGTTGTTTCTCTCATTTTTTTGCTGCTGCAGAAAATGATGAAGTATCAGCTTTGCTTTCTATAAAAGCAGGTCTTGTTGATCCTTTGAACACCCTGCAGGATTGGAAACCGAATGACAAATTACCAGGAAAGGATGCAGCACATTGTAACTGGATTGGTGTAAAATGCAACTCAGCTGGAGCTGTGGAGAAGCTTGATCTCTCCCACAAGAATCTCAGTGGTATAGTATCCAATGATATACAAAAACTTAGAAGTCTTGCTTCAATCAACTTATGTTGCAATGCTTTTTCATCACCATTGCCAAAATCCTTAGCCAATCTCACCACACTTAACAGTCTTGATGTCAGCCAAAATTTCTTCAATGGTGATTTTCCAGTAGGCCTTGGAAGGGCATGGAGACTTATGACCTTAAATGCATCCAGCAATGAGTTCTCCGGTTCTCTTCCTGAGGACCTTGGAAATGCCTCTTCCTTAGAAATGCTGGATCTCAGAGGCAGCTTCTTCGTAGGGTCGGTTCCAAAATCGTTCAGTAACTTGCATAAGTTGAAGTTCCTTGGTCTATCAGGAAATAATCTCACAGGGAAAATTCCTGCAGAGCTGGGGCAACTTTCATCACTGGAATCAATGATCCTTGGTTATAATGAATTTGAAGGTGGGATTCCAATAGAGTTTGGAAATCTCACCAATCTTAAGTATCTTGATTTAGCAGTAGCCAATCTTGGTGGTGAGATTCCAGCTACATTGGGAAAGCTCGAGTTATTGGATACAGTTTTCTTATATAACAACAATTTTGAAGGCAGAATTCCATTAGAAATTGGCAACATGAGTTCTTTGCTGTTGCTGGATCTTTCTGATAACATGTTTTCAGGAAGAATTCCAGCAGAAATAAGTCAGCTGAAGAATTTGAAGCTTCTGAACTTGATGGGCAACAAGTTGTCTGGTCCTGTGCCTTCTGGATTTGGAGGTTTGCCTCAATTGGAGGTACTTGAGCTATGGAACAATTCCTTGTCAGGACCATTGCCTAGTAACCTTGGCAAGAATTCACCATTGCAATGGTTTGATGTATCATCCAATTCACTTTCTGGAGAGATTCCAGAAACTCTTTGCAGCCAAGGCAATCTCACCAAGCTTATACTTTTCAACAATGCCTTCTCTGGTCCAATTCCATCAAGCCTATCAATGTGTCCTTCACTTGTTCGTGTTCGAATTCAAAACAATTTTCTTTCTGGGACAGTTCCTGTGGGCTTTGGGAAGCTTGGGAAGCTTCAAAGGTTAGAATTAGCTAACAATACTCTCTCTGGTGGAATTCCAGATGACATTGCTTCTTCCGCATCCCTTTCTTTCATTGATCTCTCAAGAAACAAACTCCATTCTTCTCTTCCTTCCACAGTTCTTTCCATTCCAAACCTGCAAGCTTTCATGGTCTCCAACAACAACTTGAAAGGTGAAATCCCAGACCAATTCCAGGACTGTCCCTCACTTACAGTTCTTGATCTCTCATCAAATTATTTATCTGGAAGCATTCCAGCAAGCATTGCTTCATGTCAAAAGTTGGTAAATTTGAACTTGCAAAACAACCTATTGAGTGGTGAAATCCCAAGAGCATTAGCCAGCATGACTACATTAGCCATGCTTGATCTTTCCAACAATTCACTGACAGGTCAAATACCAGAAAGCTTTGGTCTTTCTCCAGCTCTGGAAGCATTCAATGTTTCATACAATAAACTAGAAGGCTCTGTCCCGGCAAATGGAATGCTAAGAACTATAAACCCAAATGATCTCGTGGGAAATGCTGGCCTATGTGGTGGTATCCTCCCTCCATGTGACCAGAACTCTGCATACTCATTAAGGCATGGAAGCTCACATGCAAAGCACATTATTACTGGATGGATTGCCGGAATATCATCGATCCTTGTTATCGGGATTGCAATTTTGGTTGCAAGATCTTTGTACTTAAGGTGGTACACTAATGGATTTTGCTTCCAAGAAAGATTTTATAAGGGTAGCAAAGGGTGGCCTTGGAGATTGATGGCATTTCAAAGGCTTGGTTTTTCTAGTACTGACGTTCTAGCTTGCATCAAGGAAACCAATGTGATTGGCATGGGAGCTACTGGAGTTGTTTATAAGGCTGAGATACCACAATCAAATACAGTTGTGGCAGTGAAAAAATTGTGGAGGTCAGGAAATGATATTGAAGTAGGAAGCAGCGATGACCTTGTGGGAGAGGTGAATCTTCTAGGGAGGCTAAGGCATAGGAACATTGTTAGACTATTAGGATTTCTATATAATGACACTGATGTGATGATAGTTTATGAATTCATGCACAATGGAAACCTTGGAGATGCCCTGCATGGTAGACAAGCAGCAAGACTGCTTGTAGACTGGGTTTCGCGGTATAACATAGCTCTAGGAGTTGCACAAGGACTTGCTTATCTTCATCATGACTGTCATCCACCCGTTATCCATAGAGATATCAAGTCAAATAACATATTGCTTGATGCAAATCTTGAGGCCAGGATAGCAGATTTTGGTTTAGCCAAGATGATGATCAGGAAGAATGAAACAGTATCCATGGTTGCTGGATCATACGGTTACATTGCCCCTGAATATGGATATGCCTTGAAGGTGGATGAAAAGATTGATGTTTACAGTTATGGAGTAGTTTTGTTGGAGCTTCTCACGGGTAAAAGGCCTTTGGATCCAGATTTTGGAGAGTCAGTGAACATAGTAGAGTGGATTAGAAGGAAGATTAGAGACAACAAATCTCTAGAAGCAGCATTAGACCCAATTGTAGGAAACTGCAAACATGTTTTAGAAGAGATGCTTTTAGTTCTAAGAATAGCTATTCTTTGCACTGCCAAGCTCCCTAAGGACAGACCCACCATGAGGGATGTCACAATGATGCTTGGAGAGGCAAAGCCTCGTAGAAAGAGCAGTGGCAACAATGAAACATGTGCAGCTAACAACAAAGACATGTCAAGTTTTAGCACATCACCATGTTAA 3057 0.4092 MKKNKMKMKKFFIFFSYISCFSHFFAAAENDEVSALLSIKAGLVDPLNTLQDWKPNDKLPGKDAAHCNWIGVKCNSAGAVEKLDLSHKNLSGIVSNDIQKLRSLASINLCCNAFSSPLPKSLANLTTLNSLDVSQNFFNGDFPVGLGRAWRLMTLNASSNEFSGSLPEDLGNASSLEMLDLRGSFFVGSVPKSFSNLHKLKFLGLSGNNLTGKIPAELGQLSSLESMILGYNEFEGGIPIEFGNLTNLKYLDLAVANLGGEIPATLGKLELLDTVFLYNNNFEGRIPLEIGNMSSLLLLDLSDNMFSGRIPAEISQLKNLKLLNLMGNKLSGPVPSGFGGLPQLEVLELWNNSLSGPLPSNLGKNSPLQWFDVSSNSLSGEIPETLCSQGNLTKLILFNNAFSGPIPSSLSMCPSLVRVRIQNNFLSGTVPVGFGKLGKLQRLELANNTLSGGIPDDIASSASLSFIDLSRNKLHSSLPSTVLSIPNLQAFMVSNNNLKGEIPDQFQDCPSLTVLDLSSNYLSGSIPASIASCQKLVNLNLQNNLLSGEIPRALASMTTLAMLDLSNNSLTGQIPESFGLSPALEAFNVSYNKLEGSVPANGMLRTINPNDLVGNAGLCGGILPPCDQNSAYSLRHGSSHAKHIITGWIAGISSILVIGIAILVARSLYLRWYTNGFCFQERFYKGSKGWPWRLMAFQRLGFSSTDVLACIKETNVIGMGATGVVYKAEIPQSNTVVAVKKLWRSGNDIEVGSSDDLVGEVNLLGRLRHRNIVRLLGFLYNDTDVMIVYEFMHNGNLGDALHGRQAARLLVDWVSRYNIALGVAQGLAYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMMIRKNETVSMVAGSYGYIAPEYGYALKVDEKIDVYSYGVVLLELLTGKRPLDPDFGESVNIVEWIRRKIRDNKSLEAALDPIVGNCKHVLEEMLLVLRIAILCTAKLPKDRPTMRDVTMMLGEAKPRRKSSGNNETCAANNKDMSSFSTSPC* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0071 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 838 850 IPR008271 GO:0004672|GO:0006468
Apr4g0071 1018 MobiDBLite consensus disorder prediction 997 1018 - -
Apr4g0071 1018 Pfam Leucine rich repeat 486 546 IPR001611 GO:0005515
Apr4g0071 1018 Pfam Leucine rich repeat 175 233 IPR001611 GO:0005515
Apr4g0071 1018 Pfam Leucine rich repeat 414 474 IPR001611 GO:0005515
Apr4g0071 1018 SMART LRR_typ_2 341 365 IPR003591 -
Apr4g0071 1018 SMART LRR_typ_2 293 317 IPR003591 -
Apr4g0071 1018 SMART LRR_typ_2 197 221 IPR003591 -
Apr4g0071 1018 SMART LRR_typ_2 437 461 IPR003591 -
Apr4g0071 1018 SMART LRR_typ_2 245 269 IPR003591 -
Apr4g0071 1018 SMART LRR_typ_2 509 533 IPR003591 -
Apr4g0071 1018 SMART LRR_typ_2 485 508 IPR003591 -
Apr4g0071 1018 SMART LRR_typ_2 557 580 IPR003591 -
Apr4g0071 1018 SMART serkin_6 711 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0071 1018 ProSiteProfiles Protein kinase domain profile. 711 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0071 1018 SUPERFAMILY Protein kinase-like (PK-like) 708 987 IPR011009 -
Apr4g0071 1018 Pfam Leucine rich repeat N-terminal domain 30 75 IPR013210 -
Apr4g0071 1018 Gene3D Phosphorylase Kinase; domain 1 711 795 - -
Apr4g0071 1018 ProSitePatterns Protein kinases ATP-binding region signature. 717 741 IPR017441 GO:0005524
Apr4g0071 1018 Gene3D Ribonuclease Inhibitor 273 338 IPR032675 -
Apr4g0071 1018 Gene3D Ribonuclease Inhibitor 203 272 IPR032675 -
Apr4g0071 1018 Gene3D Ribonuclease Inhibitor 339 633 IPR032675 -
Apr4g0071 1018 SUPERFAMILY L domain-like 65 356 - -
Apr4g0071 1018 Gene3D Transferase(Phosphotransferase) domain 1 796 1013 - -
Apr4g0071 1018 MobiDBLite consensus disorder prediction 990 1018 - -
Apr4g0071 1018 SUPERFAMILY RNI-like 259 600 - -
Apr4g0071 1018 Gene3D Ribonuclease Inhibitor 29 193 IPR032675 -
Apr4g0071 1018 PANTHER UNNAMED PRODUCT 11 1000 - -
Apr4g0071 1018 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 11 1000 - -
Apr4g0071 1018 Pfam Protein kinase domain 713 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0071 Apr-Chr4 605078 608520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0071 6 1018 Receptor kinase-like Gene Family AT1G08590 59.439 0.0 1165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr4g0071 Pkinase 7.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0071 - - gmx:100811284 1754.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0071 4 605078 608520 Apr4g0071 4 605078 608520 ECH