Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0064 ATGGCACCCAATCCAAGAGTGGTGCAGGCCTATCGAGCAATGGCCAATCTTGGGATTCATGAATCCAAAGTGAAGCCAGTATTAAAGAAACTACTTAAATTGTATGATAAAAATTGGGAACTCATCGAAGAAGAGAGTTATAGGGCTCTGGCAGATGCCATATTTGAGGAGGACGAAAATAAGGGGTCGGAGGCGGACCAGGAAAACACAAGCAAGAAGGATGATGAAGAAGCTCATATGCATGATGAGCCAGTGCGGCCATTGAAGAGGTTGCGTTTAAGAGGTCAAGATGGTCATTCTTCACGTCCTTTGACTAGCTGTGGCCCCAGCACAGCGGCCTTGCCACTGAAAACGCCTAAGTTAGAAGATGACACAGTGCCTGAAAGTAGTTTCGGACTACAGCCTCAGAGTACAACAGCTTTATCCGATGGGAATGCAAGGATTGAAGCTGGTCAAGTTCCATTAAGAGATGCCACTGTTGATAAGGGAAAGAAACCTGTATCACCTCAAGTTACTCAGAGAGGGAGGTGGTCTATTTCTGATGGAACTCACCGTCTAGAACCAGTTAAAGAGCCAACAATTGAACCAGGAGCCTCTTTGTTGTCAAAAAACAAAGTGTCTCATCAATTTACTTTGCTCAAGCCCAAGGATGAACCTATTGATGATATGCCAGATTATCTGATTCCCATTGCAGTGATTCCTCCTGAACCATCAAGTGGAAGAGACTCTCTGATGAGAGGTGCAGCTGGAAAGCAACATGGCCATGACACTGTTGCATTACAAAGCAGAGATGTAGACGTTGAAGGTGAAGATATTCTTCCTTCCTCAAATGAAGAAGCAATTTCTAATGTAGATTTAGGCTTGTCATCTATGGGAGAGGATGGTTCTGTAGAGATAATGCAATCTGTTGACGACGTTTCAAAGGAATCTGAGGCAAATGACTCACTGATTGCCAGAGGAAATAAAGATTTGGTTATGCCTTCTTGCATTGCAAATGGATCAATCAATGTGAAGTCTTCTTCTGCCATTGATGCACCTCAAGGTCAAAATTCTCTACCCTGCCTGGGTGGTCTGGATGATGCTGTGCTAGTTTCCAAGAAGGTTGGAGTGAATGATTTATTAGAAAGTGGTGGTCAGAAGGAGCTGGAGGATCCTATATCCCCAAATTCACGTACTTCAGATGTTTTTCCAAATCATCAGCTTACAACTGATGATATAAGGGCTGTTCATGATGTTAATGATCTAACAAAGGGAGAAGAAAGAGTGAAAGTTTCATGGGTGAATAACACTACTAATGATTTCTCACCACCACCCTTTCATTACATGCCCCGAAACCTTGTGTTCCGAGATGCCTGCGTTAATATTTCTCTTTCTTGTATTGGTAATGGAGATTGTTGTTCATATTGTATGGGCAACTGTGTATTGTCATCTAAACCATGTTCTTGTACAAATAAAACTGGGGGTCAATTTGCTTACACTGCACAAGGACTACTAAAGAAAGAGTTTTTGGAAGAGTGTATTGCGATCAGCCGTGACTCTCAAAATTATTTCTATTGCAAAGAGTGCCCGTTTGAAAGATCAAAGAATGATGATTGTTTAGAACCATGTAAAGGACACTTAAAGAGGAGGTTTATTAAGGAGTGTTGGAGCAAATGTGGCTGTGGGAAACATTGTGGCAATCGGGTTGTCCAGTGTGGGATGACTTACAACTTGCAGGTGTTTTTAACTTTAGATGGAAAAGGGTGGGGTCTTCGGACCTTAGAGGATCTTCCAAAAGGTGCATTTGTTTGTGAGTTTATTGGGGAAATTTTAACTGTCAAAGAGTTGCGCGAGAGGAACTTGAAATATCCCCAAAATGGGAGCTATACATACCCAATTTTATTGGATGCAGAATGGGATTCAGGAGTAGTGAAGGATAGAGAAGCTCTTTGCTTATATGCAGCATCATATGGAAATGTTGCTAGGTTTATTAATCACAGATGTTTGGATGCAAACTTGATTGAGATCCCAGTTGAAATTGAGGTCCCAGCTCATCACTACTATCATTTTGCCTTCTTCACTTCCCGAAAAATAGCAGCACAGGAAGAGCTCACTTGGGACTATGGCATCAACTTCGATGACCATGATCAGCCTGTTGAGCTGTTCCACTGCAGATGTGGTAGTAAATTCTGCAGGGATATTAAGCGATCAAATAGATCCATTAGATCGACAGTAGCATGA 2220 0.4207 MAPNPRVVQAYRAMANLGIHESKVKPVLKKLLKLYDKNWELIEEESYRALADAIFEEDENKGSEADQENTSKKDDEEAHMHDEPVRPLKRLRLRGQDGHSSRPLTSCGPSTAALPLKTPKLEDDTVPESSFGLQPQSTTALSDGNARIEAGQVPLRDATVDKGKKPVSPQVTQRGRWSISDGTHRLEPVKEPTIEPGASLLSKNKVSHQFTLLKPKDEPIDDMPDYLIPIAVIPPEPSSGRDSLMRGAAGKQHGHDTVALQSRDVDVEGEDILPSSNEEAISNVDLGLSSMGEDGSVEIMQSVDDVSKESEANDSLIARGNKDLVMPSCIANGSINVKSSSAIDAPQGQNSLPCLGGLDDAVLVSKKVGVNDLLESGGQKELEDPISPNSRTSDVFPNHQLTTDDIRAVHDVNDLTKGEERVKVSWVNNTTNDFSPPPFHYMPRNLVFRDACVNISLSCIGNGDCCSYCMGNCVLSSKPCSCTNKTGGQFAYTAQGLLKKEFLEECIAISRDSQNYFYCKECPFERSKNDDCLEPCKGHLKRRFIKECWSKCGCGKHCGNRVVQCGMTYNLQVFLTLDGKGWGLRTLEDLPKGAFVCEFIGEILTVKELRERNLKYPQNGSYTYPILLDAEWDSGVVKDREALCLYAASYGNVARFINHRCLDANLIEIPVEIEVPAHHYYHFAFFTSRKIAAQEELTWDYGINFDDHDQPVELFHCRCGSKFCRDIKRSNRSIRSTVA* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0064 739 MobiDBLite consensus disorder prediction 129 143 - -
Apr4g0064 739 MobiDBLite consensus disorder prediction 383 397 - -
Apr4g0064 739 Pfam Pre-SET motif 416 561 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Apr4g0064 739 Gene3D - 1 60 IPR043017 -
Apr4g0064 739 Pfam SET domain 581 702 IPR001214 GO:0005515
Apr4g0064 739 MobiDBLite consensus disorder prediction 378 397 - -
Apr4g0064 739 Gene3D SET domain 415 727 IPR046341 -
Apr4g0064 739 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 738 - -
Apr4g0064 739 ProSiteProfiles Pre-SET domain profile. 455 566 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Apr4g0064 739 MobiDBLite consensus disorder prediction 58 143 - -
Apr4g0064 739 SMART preset_2 412 553 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Apr4g0064 739 ProSiteProfiles SET domain profile. 569 702 IPR001214 GO:0005515
Apr4g0064 739 CDD SET_SETDB-like 437 702 - -
Apr4g0064 739 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 1 738 - -
Apr4g0064 739 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 739 IPR025776 -
Apr4g0064 739 SUPERFAMILY SET domain 422 725 IPR046341 -
Apr4g0064 739 MobiDBLite consensus disorder prediction 58 97 - -
Apr4g0064 739 Pfam Ubiquitin-binding WIYLD domain 6 60 IPR018848 GO:0018024
Apr4g0064 739 SMART set_7 569 708 IPR001214 GO:0005515
Apr4g0064 739 MobiDBLite consensus disorder prediction 237 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0064 Apr-Chr4 554901 563123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0064 414 725 Su(var)3-9 homologs AT1G73100 31.307 1.29e-29 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Apr4g0064 Pre-SET 4.9e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0064 - - gmx:100788602 1102.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0064 4 554901 563123 Apr4g0064 4 554901 563123 ECH
Apr8g0363 8 3063216 3069559 Apr4g0064 4 554901 563123 PCT