Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0023 ATGGCAAAAGAACAAATTCAGGTGCTGAATGCACTTGATGGAGCAAAAACACAATGGTACCATTTCACTGCAATCGTCATTGCTGGAATGGGCTTCTTCACTGATGCATATGATCTATTCTGCATCTCCCTTGTTACGAAGTTGCTTGGCCGCATTTACTACCACGTTGATGGCTCTCCAAAGCCCGGTTCATTGCCTCCCAACGTAGCTGCTGCTGTAAATGGTGTAGCTTTCTGTGGAACACTTTCAGGGCAACTTTTCTTTGGTTGGCTTGGAGATAAGATGGGTAGAAAAAAAGTGTACGGCATGACTCTGATGATGATGGTAATATGCTCCATTGGTTCTGGCCTTTCATTTGGACATAGTCCAAAATCTGTCATGGCAACTCTTTGCTTCTTTCGGTTCTGGCTTGGATTTGGTATTGGTGGAGACTACCCACTTTCTGCCACTATAATGTCCGAGTATTCTAGTAAGAAGACTCGTGGTGCCTTCATTGCTGCAGTCTTTGCCATGCAGGGTTTTGGAATCTTGGCAGGCGGTATATTTGCCATTATAATTTCAGCTATATTCAAGGCCAGGTTTGACTCTCCACCTTATCAGGTTGATCCAGTTGGCTCGACTGTTCCACAAGCAGACTACGTTTGGAGGATAATTGTTATGGTGGGAGCACTTCCCGCCGCATTGACATACTACTGGCGATTGAAGATGCCAGAAACCGCTCGTTACACCGCACTAGTCGCCAAGAACATGGAGCAAGCGGCAGCAGATATGTCTAAGGTTATGCAGGTTGAGATTCAAGCTGAACCAAGGAAACAAGATGAGACAGAGGCTAATTCATATGGCTTGTTCTCAAAGCAATTCCTCCATCGCCATGGACTACATCTACTTGGTACAGCAAGCACATGGTTCTTGCTTGACATTGCATTTTATAGCCAAAACCTTTTCCAGAAGGATATCTTTAGTGCAATTGGTTGGATTCCTCCTGCAAAAACCATGAATGCCCTTGAGGAGGTTTACAAGATTGCAAGAGCTCAAACACTTATTGCTTTGTGCAGTACGGTTCCAGGCTATTGGTTTACGGTGGCTTTTATTGATATCGTTGGAAGATTTGCTATTCAATTGATGGGTTTCTTCTTTATGACTGTCTTCATGTTTGCTCTTGCCATTCCTTATGACCACTGGACTCACAAGGATCATCGAATAGGATTCGTAGTGATGTATTCCTTGACCTTCTTCTTTGCAAATTTTGGGCCCAATGCTACCACATTTGTCGTCCCAGCTGAAATTTTTCCTGCAAGATTCCGATCCACATGCCATGGAATTTCATCGGCAGCAGGGAAACTTGGGGCTATTGTTGGTTCATTTGGGTTCTTGTATTTGGCACAAAACAAAGACAAGAGCAAAGCAGATGCAGGATATCCAGCAGGTATTGGTGTGAAGAATGCACTGCTTATTTTAGGTGTGATTAACGTATTAGGCTTCTTATTGACTTTCTTAGTTCCTGAGGCAAAAGGAAAATCTTTGGAAGAAATGTCAGGTGAAAATGATGAAGAAAGTGAAACCAGGGAAGTGTCAGAGCAACCATATTCTCACAACAACGGCAAAACTGTTTCCTATGTTTAA 1623 0.4331 MAKEQIQVLNALDGAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGSPKPGSLPPNVAAAVNGVAFCGTLSGQLFFGWLGDKMGRKKVYGMTLMMMVICSIGSGLSFGHSPKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYSSKKTRGAFIAAVFAMQGFGILAGGIFAIIISAIFKARFDSPPYQVDPVGSTVPQADYVWRIIVMVGALPAALTYYWRLKMPETARYTALVAKNMEQAAADMSKVMQVEIQAEPRKQDETEANSYGLFSKQFLHRHGLHLLGTASTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMNALEEVYKIARAQTLIALCSTVPGYWFTVAFIDIVGRFAIQLMGFFFMTVFMFALAIPYDHWTHKDHRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSAAGKLGAIVGSFGFLYLAQNKDKSKADAGYPAGIGVKNALLILGVINVLGFLLTFLVPEAKGKSLEEMSGENDEESETREVSEQPYSHNNGKTVSYV* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0023 540 SUPERFAMILY MFS general substrate transporter 14 512 IPR036259 -
Apr4g0023 540 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-7-RELATED 1 523 - -
Apr4g0023 540 CDD MFS_PhT 25 504 - -
Apr4g0023 540 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 505 IPR020846 GO:0022857
Apr4g0023 540 Pfam Sugar (and other) transporter 25 512 IPR005828 GO:0016021|GO:0022857|GO:0055085
Apr4g0023 540 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 523 - -
Apr4g0023 540 MobiDBLite consensus disorder prediction 526 540 - -
Apr4g0023 540 Gene3D MFS general substrate transporter like domains 20 529 IPR036259 -
Apr4g0023 540 TIGRFAM 2A0109: phosphate:H+ symporter 11 514 IPR004738 GO:0005315|GO:0006817|GO:0016021
Apr4g0023 540 MobiDBLite consensus disorder prediction 509 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0023 Apr-Chr4 243518 245140 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0023 1 520 Inorganic Solute Cotransporters AT3G54700 82.308 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0023 K08176 - gmx:100819445 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0023 4 243518 245140 Apr4g0023 4 243518 245140 ECH
Apr8g0330 8 2766715 2770028 Apr4g0023 4 243518 245140 PCT