Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0015 ATGACTGGTTTAGGTTCTCCTTGTGGAGCCTGCAAATTCTTGAGAAGGAAATGTGTGAGAGGTTGTGTTTTTGCACCTTATTTTTGCCATGAACAGGGTGCTACTCATTTTGCAGCCATTCATAAAGTCTTTGGTGCAAGCAATGTCTCAAAGCTCCTTGCTCACCTACCTGTGAGTGACCGGTGTGAAGCCGCAGTAACAATCTCATATGAAGCTCAAGCTAGACTTCAGGATCCTATTTATGGCTGTGTTGCCCATATTTTTGCACTCCAACAGCAGGTGGTGAATTTGCAAGCACAGCTAGCTCATCTCAGGGAACAAGTAGGTCAGATCTGTCTCAATGCCTCTGCCACTGAAAACCCTAACGAGAAATACTTTGCAAAATTACCTACTACTTTCCCCCAAGATCTTCAAAATTGGTTCCAGATGGAAAATTCCAACATGGGTTCACAATTTCTTCCTAACTTGTCCACTGATCCGTCAACAACACAGTATTATGGGAATACTACTCTCATGGACCAAAACCCTATTGGAAATTATGAAAAGTCAGGAACCATGGAAGAAAGCGTCTCATTTTCTAGCTTTGAAGAGAGTTGTAACTTCATGTGCTATAACATGCAAAGGCAGTGGGCCTTTCATGAAGTAGATAACCTTCAGTAA 660 0.4227 MTGLGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVAHIFALQQQVVNLQAQLAHLREQVGQICLNASATENPNEKYFAKLPTTFPQDLQNWFQMENSNMGSQFLPNLSTDPSTTQYYGNTTLMDQNPIGNYEKSGTMEESVSFSSFEESCNFMCYNMQRQWAFHEVDNLQ* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0015 219 Coils Coil 87 107 - -
Apr4g0015 219 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 1 219 - -
Apr4g0015 219 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 219 - -
Apr4g0015 219 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
Apr4g0015 219 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0015 Apr-Chr4 148790 149578 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0015 7 200 AS2 family AT3G58190 57.143 2.09e-70 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr4g0015 LOB 5.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0015 K13945 K13944 gmx:100816960 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0015 4 148790 149578 Apr4g0015 4 148790 149578 ECH
Apr4g0015 4 148790 149578 Apr8g0312 8 2613764 2614602 PCT