Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2340 ATGGAGTCGGGTCCTCCGGCGAACGATCTGTGTTCAGTGTGTCATGGAAACTTTCACATTCCCTGCCAAGCCAATTGTTCCCACTGGTTTTGTGGGAATTGCATAGTGCTTGTGTGGCAGCATGGATCGGGGGTTCAACCATGCAAATGCCCTCTGTGTCGGCGTCCAATTACTCTTTTGGTTCCAAACGATGATTCCTTGAGACAACGTGACGATCCTGAAGTGGCTCAGATTCTCTCTAAGATTCACACTTACAATCGTTTCTTTGGTGGAAACCCAACGGGTCTCCTTCAGCGAATTCAAGATCTTCCTTTTCTGTTGCGAAGATTGCTTCGGGAATTCTCTGACCCTCGTAGATCCCTTCCTCTCGTTATCCGTGCTCGTGTCTATGTCGCTATGATAATAAGTGCTATATATGTCTTCAGTCCTATTGACATCATTCCTGAAGGAATATTAGGAATAGTTGGTCTCTTGGATGATCTCCTAATTGTGCTCATCTTCTTTCTGCATGTTGCTGCCCTTTATAGATCAGTACTTTACCTCCGTCATGGGGGTTCCTAA 561 0.4581 MESGPPANDLCSVCHGNFHIPCQANCSHWFCGNCIVLVWQHGSGVQPCKCPLCRRPITLLVPNDDSLRQRDDPEVAQILSKIHTYNRFFGGNPTGLLQRIQDLPFLLRRLLREFSDPRRSLPLVIRARVYVAMIISAIYVFSPIDIIPEGILGIVGLLDDLLIVLIFFLHVAALYRSVLYLRHGGS* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2340 186 ProSitePatterns Zinc finger RING-type signature. 26 35 IPR017907 -
Apr3g2340 186 PANTHER UNCHARACTERIZED 6 186 IPR038896 GO:0061630
Apr3g2340 186 PANTHER BNAC07G13660D PROTEIN 6 186 - -
Apr3g2340 186 Pfam Protein of unknown function (DUF1232) 131 165 IPR010652 -
Apr3g2340 186 SUPERFAMILY RING/U-box 9 61 - -
Apr3g2340 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 90 IPR013083 -
Apr3g2340 186 ProSiteProfiles Zinc finger RING-type profile. 11 54 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2340 36 186 C3H Transcription Factor Family AT1G72175 71.523 3.62e-66 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2340 K15707 - gmx:100306204 287.73