Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2335 ATGGCTTCTAAACAATGGCCACATGAGCAACTTGAACCATCTTTCTTTTCTTTTACCTTTCACCGATTTCTATTATGCTACCTTCTAATTACTATCATTGTTGTGTTGAAGCTAGCAAGGGCCAAAATCAAAGCCAATCTCAATCTACCTCCATCCCCTCCAAAGCTACCAATCATTGGCAATCTTCATCAACTAGGCACATTCCCATACCACTCCTTCAGAGCCCTCTCACACAAGTATGGTGCTCTTATGATGTTGAAGTTGGGGAAGACTCAAGCCATTGTGGTTTCATCTGCAGATGTGGCCAAGGAAATCGTGACAACTAATGACATAACATTCTCAGACAGACACAAAATCACAGCAGTGAAAACCATGTTGTATGGAGGTAATGACATTGGTTTTGGATCCTATGGAGAAAGGTGGAAACAAAAAAGAAAAATATGTGTCCTTGAGCTTTTGAACCACAAAAGGGTGCAATCATTTAGTCACATCAAAGAAAAAGAGGTAGCACAAATGGTTAACAAGATACATGAAGCAACCTTGAATGGTGCACCCTCTGTGAATCTAAGTGAGTTGCTCATCGAAACAGCAAACAATATCATATGTAAATGTGCTCTTGGACAGAATCACAATTTAGAAGACTGCTATATGAAGGTTAAAGAGATTTCAAGAAAGATGATGATTCTTCTTACAGTTAACACTTTGGGAGATCACTTTCCTTTCTTGGGTTGGGTTGATGTTCTCACAGGCAAAATTAAACAATTCAAGGCCACTTTTGGAGCATTGGATGCTTTATTTGATCAGGTGATTGCTGAGCACAAGAGGATGAAGAGGGAAACTGACAACCCCTCCACTGAGAAAGACTTTGTGGATATCCTCATCCAAGTTCAGGAGGGTGGCATGCCTGGCTTTGAGCTCACCAATGAAGACATTAAATCAATTCTATTGGATATGTTTACAGCAGGAAGTGATCCAACCGCAACAACATTAGAATGGGCTATGGCAGAGCTCATGAGAAACTCATTGAAATTAGAGAAAGCCCAAGAAGAGGTGAGAAAATTTGTAGGGCATAAATCAAAAGTAGAAGAAAATGATATAAACCAAATGGACTACGTCAAATGTGTGGTCAAAGAAACTTTAAGGTTGCATCCACCAGCTCCATTCTTGATTCCTAGAGAGACATCATCTAATGTGAAGCTTAGAGGGTATGATATTCCAGCAAAAACAATGGTATATGTGAATGCATGGGCAATTCAAAGGGACCCTCAACTTTGGGAAAGGCCAGAAGAGTTCATTCCAGAGAGATATGATAGCAATCATGTTCCTTTCAAAGGCCAAGATCTCCATTTTATTCCATTTGGTTTTGGGAGAAGGGCATGCCCTGGAATGACATTTGGGCTTGCTTCTCTTGAGTATATTCTAGTCAACCTTCTCTGTTGGTTCAATTGGAAGCTGCCAGAAACTTATACATGTGGACAAGACATAGACATGAGTGAGACATATGGGCTCATTACTTCCAAAAAAGTCCCTCTTCATCTCAAACCAATTCCTTTGTCATCTCAAACCAATTTCTAG 1575 0.4006 MASKQWPHEQLEPSFFSFTFHRFLLCYLLITIIVVLKLARAKIKANLNLPPSPPKLPIIGNLHQLGTFPYHSFRALSHKYGALMMLKLGKTQAIVVSSADVAKEIVTTNDITFSDRHKITAVKTMLYGGNDIGFGSYGERWKQKRKICVLELLNHKRVQSFSHIKEKEVAQMVNKIHEATLNGAPSVNLSELLIETANNIICKCALGQNHNLEDCYMKVKEISRKMMILLTVNTLGDHFPFLGWVDVLTGKIKQFKATFGALDALFDQVIAEHKRMKRETDNPSTEKDFVDILIQVQEGGMPGFELTNEDIKSILLDMFTAGSDPTATTLEWAMAELMRNSLKLEKAQEEVRKFVGHKSKVEENDINQMDYVKCVVKETLRLHPPAPFLIPRETSSNVKLRGYDIPAKTMVYVNAWAIQRDPQLWERPEEFIPERYDSNHVPFKGQDLHFIPFGFGRRACPGMTFGLASLEYILVNLLCWFNWKLPETYTCGQDIDMSETYGLITSKKVPLHLKPIPLSSQTNF* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2335 524 Pfam Cytochrome P450 50 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2335 524 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2335 524 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2335 524 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2335 524 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2335 524 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2335 524 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2335 524 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2335 524 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2335 524 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2335 524 PANTHER CYTOCHROME P450 71B11-RELATED 19 518 - -
Apr3g2335 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Apr3g2335 524 Gene3D Cytochrome P450 39 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2335 524 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 19 518 - -
Apr3g2335 524 SUPERFAMILY Cytochrome P450 50 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2335 524 Coils Coil 344 364 - -
Apr3g2335 524 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2335 524 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2335 524 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2335 524 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2335 Apr-Chr3 38888704 38891101 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2335 24 516 Cytochrome P450 AT5G25120 40.281 2.12e-131 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2335 K20617 - gmx:100785621 739.184