Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2318 ATGCATGCAATCCAAACCAAAGAAGCAAATATGCCTTTGTTTTCTCAGCCACTTCTTCATTTTGCCTTACTAATCATCCTCCTCCCCTTTAGTTTACACAACCATGATTTAGTTGGTGCATCATCAGCCACTTTAAGCATTACCACAGACACAGAAGCCTTGATCTCATTGAAGTCTCAATTGAGCAATGACACTCTCAACCCTTTATCTTCTTGGAACCAAAGTTCATCCCCTTGCAAAAATTGGACTGGTGTGCTATGTGACAAGCTTGGCCAAAGAGTGACTAGCCTTGATCTTTCAGGCTTGGGACTCTCAGGTCAGCTAACTGCTTATATAGGTAACTTGTCCTTTCTCGAGTCTCTCCAATTGCAGAATAACCAACTCACAGGGGTGATTCCTCACCAAATTTCCAATCTATTCAGTTTGAGAGTTCTAAACATGAGCTCTAACTTATTTGAAGGAAATCTTCCTTCAAACATCACCAACTTGAATCAGCTCCAGATTCTTGATCTATCCTCCAACAAGATTGTCAGCAACATTCCTGAAGATATCAGCAGCTTGAAAAGGCTTGAAGTCTTGAAACTAGGAAGAAATAGCCTCTATGGTGCAATCCCAGCATCTCTAGGAAACATTTCTTCACTCAAAAATATCAGCTTTGGCACCAACACTCTCAGTGGTTTGATTCCAAGTGAGTTGGGTAGGCTCCATAATTTGATTGAGCTTGATCTCACTCTTAACAATCTAACTGGGACCGTTCCACCTTCTATATATAACTTATCTTCCCTTCTTAACTTGGCCTTAGCTGCAAACTCTTTGTGGGGTGAGATTCCTCATGATGTTGGTCACAAACTCCCAAAACTGTTGGTGTTCAATTTCTGCTTCAATAAATTCACAGGTAGAATTCCAGGGTCATTGCACAACCTCACCAACATTAGGATCATTCGCATGGCTTCCAACCTTTTGGAAGGAACAGTGCCACCTGGTTTGGGAAATCTACCATTTCTTCACATGTATAATATTGGTTATAATAGGATAGTGAGTTCAGGTGTGAGAGGCCTAGACTTCATTACTTCATTGACGAATAGCACCCACCTGAACTTCCTAGCAATTGATGGCAATATGCTGGAAGGTGTGATTCCTGAAACCATTGGCAATCTCTCCAAGGAACTCTCAAAATTATACATGGGAGAGAATCGTTTCAATGGAAGCATACCCTCCTCCATTGGTCGTCTTAATGGTTTGAGGTTGTTAAACTTAAGCTACAATTCAATCTCTGGAAAAATCCCACATGAGCTAGGCCAGTTAGAGCAATTGCAAGAGCTATGTCTGGCAGGAAATAAGATATCCGGAAGTATTCCAAATTCCCTTGGTAATCTTCTAAAGTTAAACCAAATTGATTTGTCAAGAAACCAACTTGTGGGGAGAATACCTATTAGTTTTGGAAATTTTCAAAACCTGCTCTACATGGACTTATCCAGCAACAAACTCAATGGAAGCATTCCAATTGAAATCCTCAATCTCCCAACTTTGAGCAGTGCTTTGAACTTGTCTATGAACTTTTTGAGTGGACAAATTCCCCAAGTTGGGAAATTGATTAGCGTTGCCTCCGTTGACCTTTCTAGCAACCAATTGTTTGGTGACATCCCTGGCTCATTCAGCAATTGTCTCAGCTTGGAAAAGTTGATTTTGGCCAGGAATCTGCTTTCGGGTCCCATTCCAAAGACTCTTGGAGATGTGAGAGGCTTGGAAACTTTGGACCTGTCCTCCAACCGACTCAGTGGATCCATTCCTGATGCACTTCAGAATCTACATATCCTTATGCTGTTAAACCTCTCTTACAATGATCTAGAAGGAATAATTCCAAGTGGTGGAGTTTTTAAAAATCTCTCAGCTGTCCATTTTGAAGGCAATAGGAAACTCTGCTTGCATTTTGCATGCGTGCCTCATGGCCAAGGAAGAACAAATGTAAAACTTTACATCATCATAGCCATAGTGGTAGCATTGATACTATGTCTCACAATTGGCTTCCTACTATATATAAAGAAGAGAAAAGTGAAGGTAACAACAGCTGCAGCATCTGAACAGCTAAAACCTCAAGTTCAAATGATCTCGTATGATGAGCTTCGGCTGGCAACGGAAGAGTTCGGCCAGGAAAATTTAATAGGAGTTGGGAGCTTTGGCTCAGTTTATAAAGGCCATCTAAGTCATGGAAATACTGTAGCAGTGAAAGTCCTTGACCCTCTGAGAACCGGTTCTTTGAACAGTTTCTTTGCAGAGTGTGAAGCTATGAGGAACGCAAGGCATCGAAATCTGGTTAAGCTGATCACATCATGCTCTAGTATTGACTTCAAAAACAATGATTTTCTGGCTCTGGTGTATGAGTACTTGTGTAATGGTAGCTTGGAAGACTGGATTAAGGGGAGGAGAAAGCACGAAAATGGAAATGGGTTGAGCCTTATGGAAAGACTGAATATAGCTATAGATGCTGCTTGTGCATTGGATTACCTGCACAATGACAGTGAAATTCCAATTGTGCACTGTGATTTGAAGCCTAGCAACATTCTACTGGATAAAGACATGACAGCAAAGGTTGGTGACTTTGGATTGGCTAGGTTGCTGATTCAAAGACCAAGTAATCAAGTTTCCATTAGCTCTACTCGTGTCCTTAGGGGTTCAATTGGTTACATACCTCCAGAGTATGGATGGGGAGAGAAACCATCAACATCTGGAGATGTATATAGTTTTGGCATAGTGTTACTAGAGCTCTTCACTGGGAAAAGCCCAACAGATGAGTACTTCACCGGAGGCCTAAGCATAAGAAGATGGGTGCAATCAGCATTCAAAGAGAAGAGTGTGCAAGTCATTGACCCTCAATTGCTATCCCTCATTTATAATGGTGACACAGCTATGGGACCAAATCTACAACTCCATTGGGTGGATGCAATTGTAGGAGTTGCCATATCCTGCACTGCAGAAAATCCAGATGACCGCATGGGCATTAGAGATGCTTTTCGCCAACTAAAAGCTGCTAAAGACTCCCTTTTGAAACTGTCTGATATCAAGAGTCCTACTGCTGCTGCCGCTACCAAGCGTTACTTCCTCGTTTCAGTAAAGTGA 3117 0.4171 MHAIQTKEANMPLFSQPLLHFALLIILLPFSLHNHDLVGASSATLSITTDTEALISLKSQLSNDTLNPLSSWNQSSSPCKNWTGVLCDKLGQRVTSLDLSGLGLSGQLTAYIGNLSFLESLQLQNNQLTGVIPHQISNLFSLRVLNMSSNLFEGNLPSNITNLNQLQILDLSSNKIVSNIPEDISSLKRLEVLKLGRNSLYGAIPASLGNISSLKNISFGTNTLSGLIPSELGRLHNLIELDLTLNNLTGTVPPSIYNLSSLLNLALAANSLWGEIPHDVGHKLPKLLVFNFCFNKFTGRIPGSLHNLTNIRIIRMASNLLEGTVPPGLGNLPFLHMYNIGYNRIVSSGVRGLDFITSLTNSTHLNFLAIDGNMLEGVIPETIGNLSKELSKLYMGENRFNGSIPSSIGRLNGLRLLNLSYNSISGKIPHELGQLEQLQELCLAGNKISGSIPNSLGNLLKLNQIDLSRNQLVGRIPISFGNFQNLLYMDLSSNKLNGSIPIEILNLPTLSSALNLSMNFLSGQIPQVGKLISVASVDLSSNQLFGDIPGSFSNCLSLEKLILARNLLSGPIPKTLGDVRGLETLDLSSNRLSGSIPDALQNLHILMLLNLSYNDLEGIIPSGGVFKNLSAVHFEGNRKLCLHFACVPHGQGRTNVKLYIIIAIVVALILCLTIGFLLYIKKRKVKVTTAAASEQLKPQVQMISYDELRLATEEFGQENLIGVGSFGSVYKGHLSHGNTVAVKVLDPLRTGSLNSFFAECEAMRNARHRNLVKLITSCSSIDFKNNDFLALVYEYLCNGSLEDWIKGRRKHENGNGLSLMERLNIAIDAACALDYLHNDSEIPIVHCDLKPSNILLDKDMTAKVGDFGLARLLIQRPSNQVSISSTRVLRGSIGYIPPEYGWGEKPSTSGDVYSFGIVLLELFTGKSPTDEYFTGGLSIRRWVQSAFKEKSVQVIDPQLLSLIYNGDTAMGPNLQLHWVDAIVGVAISCTAENPDDRMGIRDAFRQLKAAKDSLLKLSDIKSPTAAAATKRYFLVSVK* 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2318 1038 Pfam Protein kinase domain 717 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g2318 1038 Pfam Leucine rich repeat 389 448 IPR001611 GO:0005515
Apr3g2318 1038 Pfam Leucine rich repeat 534 592 IPR001611 GO:0005515
Apr3g2318 1038 Pfam Leucine rich repeat N-terminal domain 49 88 IPR013210 -
Apr3g2318 1038 SUPERFAMILY L domain-like 48 345 - -
Apr3g2318 1038 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 36 1014 - -
Apr3g2318 1038 ProSiteProfiles Protein kinase domain profile. 715 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g2318 1038 Gene3D Ribonuclease Inhibitor 243 350 IPR032675 -
Apr3g2318 1038 SMART LRR_typ_2 308 332 IPR003591 -
Apr3g2318 1038 SMART LRR_typ_2 579 602 IPR003591 -
Apr3g2318 1038 SMART LRR_typ_2 435 459 IPR003591 -
Apr3g2318 1038 SMART LRR_typ_2 163 187 IPR003591 -
Apr3g2318 1038 SMART LRR_typ_2 115 139 IPR003591 -
Apr3g2318 1038 SMART LRR_typ_2 235 259 IPR003591 -
Apr3g2318 1038 SMART LRR_typ_2 483 507 IPR003591 -
Apr3g2318 1038 ProSitePatterns Serine/Threonine protein kinases active-site signature. 844 856 IPR008271 GO:0004672|GO:0006468
Apr3g2318 1038 SMART serkin_6 715 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g2318 1038 Gene3D Transferase(Phosphotransferase) domain 1 796 1024 - -
Apr3g2318 1038 ProSitePatterns Protein kinases ATP-binding region signature. 721 743 IPR017441 GO:0005524
Apr3g2318 1038 Gene3D Ribonuclease Inhibitor 45 242 IPR032675 -
Apr3g2318 1038 CDD STKc_IRAK 721 1008 - -
Apr3g2318 1038 Gene3D Phosphorylase Kinase; domain 1 685 795 - -
Apr3g2318 1038 ProSiteProfiles Leucine-rich repeat profile. 165 187 IPR001611 GO:0005515
Apr3g2318 1038 PANTHER OS04G0122200 PROTEIN 36 1014 - -
Apr3g2318 1038 Gene3D Ribonuclease Inhibitor 351 646 IPR032675 -
Apr3g2318 1038 SUPERFAMILY L domain-like 390 641 - -
Apr3g2318 1038 SMART LRR_sd22_2 579 605 - -
Apr3g2318 1038 SMART LRR_sd22_2 435 461 - -
Apr3g2318 1038 SMART LRR_sd22_2 115 141 - -
Apr3g2318 1038 SMART LRR_sd22_2 187 219 - -
Apr3g2318 1038 SMART LRR_sd22_2 235 261 - -
Apr3g2318 1038 SMART LRR_sd22_2 163 182 - -
Apr3g2318 1038 ProSiteProfiles Leucine-rich repeat profile. 581 604 IPR001611 GO:0005515
Apr3g2318 1038 SUPERFAMILY Protein kinase-like (PK-like) 697 1007 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2318 Apr-Chr3 38720890 38724211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2318 49 1018 Receptor kinase-like Gene Family AT3G47570 41.449 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Apr3g2318 Pkinase 1.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2318 - - aprc:113860022 1959.5