Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2317 ATGGATGTTCTCATTCAGTATTTGTCACTTACTTTAATCACCTTGATTGCATCTACCTTTGTTTTCCAGAAAAGAAGACTAGGTGGATCTAAAAGCTTGCCCCCAGGTACTTTTGGGTGGCCTCTAGTGGGTGAAACCCACCATTTTTTGTTCAACAAGATTGAACATTTCATTCAAGAGAGGGTAAAAAAGTACTCTTCAGAGACATTCAAGACAAACATACTAGGAGAGCCAGCAGTGGTTCTATGTGGTCCTGCAGCAAACAAATTTGTCTCTATGAATGAACCAGAACTCATCAAAGTTTGTTACTTGAAAACTCAGCGCAGGCTCTTCAATATTCCTGATCAGCCACATGCAGCTAAGCCAAAACAAGAAGCTATAGCTGCTGCTCCAGTGAAGATCTTGGGGTTTCTGAAACCTGAAGGACTAGTTAGGTACATGGGGAACAACATTCAATCCCTCACACACCAACATTTGATGACACACTGGGAAGGAAAAACACAAGTGAAAGTGTACCCTTTGGTGAAGGTCTTTTCCCTTACAGTTGTGTATCAATTCTTCTTAGGCATTGATGATCAACACCATGTAGCCAAATTTGCCAACAAGTTTGACAACTTGTACTCTGGAGTTTATTCAGTTCCTGTGAATTTCCCTGGCTCTACATATGGTAGAGCACTCAAGGATGCAGCTGCAATTCGGAAAGAGATCCAATTTTTTATCATGGAGAAGATTGATGCTTTGTCCAAGGGCCAAGTTATGGACGACCTACTAGCACACATAGTTGGTGCTGTGCAGGATGAAAAATATGTGCCAAAACTTGAAATAAGCAACATCATCATGGGATTAATGAATTCCAGTTATATATCAATAGCTGTCATTCTATCTTTCATGATCAAACACATTGGACAGAGGCCTGATATCTACCAAAAAATCATATCCGAGCATGCTGAAATTACAAAGACCAAAGGTTGTGGTAGAGCACTAGATTGGAACAGCATACAGAAATTGAAATACACATGGGCTGTTGCACAGGAGACCATGAGACTCTACCCAACTGCACCAGGTGCATTCAGAGAGGCCATAACAGATATCACATATGAAGGTTTTACTATTCCAAAGGGATGGAAGATATTTTGGGCACTTATTGGAACAAACAAGGATCCCAGATACTTTGATGAACCAGAATGTTTTGATCCCTCAAGGTTTGAAGGGAAGGTTCCTGCACCATACACTTTTGTACCCTTTGGAGCTGGACCAAGATCTTGCCCTGGAAAGGACTACACAAGGCTTGTGGTTCTCACATTTATTCATAACCTTATAACCAAGTTCAAGTGGGAAGTTCTGCTTCCTCATGAGAAAATATTCGGTACTTTGATCCCTACCCCTGCAGAGGGAATTCCCATTCGACTTCATCGCTTATAA 1422 0.4121 MDVLIQYLSLTLITLIASTFVFQKRRLGGSKSLPPGTFGWPLVGETHHFLFNKIEHFIQERVKKYSSETFKTNILGEPAVVLCGPAANKFVSMNEPELIKVCYLKTQRRLFNIPDQPHAAKPKQEAIAAAPVKILGFLKPEGLVRYMGNNIQSLTHQHLMTHWEGKTQVKVYPLVKVFSLTVVYQFFLGIDDQHHVAKFANKFDNLYSGVYSVPVNFPGSTYGRALKDAAAIRKEIQFFIMEKIDALSKGQVMDDLLAHIVGAVQDEKYVPKLEISNIIMGLMNSSYISIAVILSFMIKHIGQRPDIYQKIISEHAEITKTKGCGRALDWNSIQKLKYTWAVAQETMRLYPTAPGAFREAITDITYEGFTIPKGWKIFWALIGTNKDPRYFDEPECFDPSRFEGKVPAPYTFVPFGAGPRSCPGKDYTRLVVLTFIHNLITKFKWEVLLPHEKIFGTLIPTPAEGIPIRLHRL* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2317 473 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Apr3g2317 473 Gene3D Cytochrome P450 24 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2317 473 SUPERFAMILY Cytochrome P450 31 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2317 473 Pfam Cytochrome P450 34 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2317 473 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 12 471 - -
Apr3g2317 473 PRINTS P450 superfamily signature 303 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2317 473 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2317 473 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2317 473 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2317 473 PRINTS E-class P450 group I signature 294 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2317 473 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2317 473 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2317 473 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2317 473 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2317 473 PANTHER CYTOCHROME P450 26 12 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2317 Apr-Chr3 38715454 38717130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2317 8 449 Cytochrome P450 AT4G19230 31.486 1.23e-66 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2317 K20667 - gmx:100782971 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2317 3 38715454 38717130 Apr3g2317 3 38715454 38717130 ECH