Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2314 ATGGTGTCACCAGGTACTCCACTATGGCGTAATGGACCAGAAGAAAAGCCAGTGTTATGCAATGCATGTGGATCAAGATACAGGATCTGGGGAAGCCTTGATGACTATCTTCCCAAACATTTTCAACCCGAGCACCTCAGTAACCTTGAAAAACTAATGCCTGGAAGCAGTCTTAATGTTAAGAATATTATCCCTTCAAGTGATGATCCAGATTCAGATGAGAAAGATTCATCTTTATGGAACCCTAAGGTCCCTTCAAAGAAACGATCACGGGTAGTATACGAGAGGATAACACCAATGAAGAGGTTCCATAAACGACTTCTCAGTATGTGGAAACATGGGAAGCCAAATGAGTCATCCCCAGAAGAGGTCTTATTATATCATAACGTGAATAACTTCATACCTAGTGGTGAAATAGGCCTTGGAGCAGTTCTTCTTAAACCAGATGGTACTTCTACATAG 462 0.4156 MVSPGTPLWRNGPEEKPVLCNACGSRYRIWGSLDDYLPKHFQPEHLSNLEKLMPGSSLNVKNIIPSSDDPDSDEKDSSLWNPKVPSKKRSRVVYERITPMKRFHKRLLSMWKHGKPNESSPEEVLLYHNVNNFIPSGEIGLGAVLLKPDGTST* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2314 153 CDD ZnF_GATA 6 28 IPR000679 GO:0006355|GO:0043565
Apr3g2314 153 PANTHER GATA ZINC FINGER PROTEIN 1 153 - -
Apr3g2314 153 MobiDBLite consensus disorder prediction 60 89 - -
Apr3g2314 153 Pfam GATA zinc finger 6 29 IPR000679 GO:0006355|GO:0043565
Apr3g2314 153 PANTHER OSJNBB0038F03.10 PROTEIN 1 153 IPR044589 -
Apr3g2314 153 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 36 - -
Apr3g2314 153 MobiDBLite consensus disorder prediction 67 89 - -
Apr3g2314 153 Gene3D - 3 123 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2314 Apr-Chr3 38694031 38694601 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2314 6 44 C2C2-Gata Transcription Factor Family AT5G47140 71.795 3.16e-13 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Apr3g2314 GATA 1.8e-09 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2314 - - vun:114178599 154.451