Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2312 ATGGGTGTGGGAAGAGGCAGTGCAATAGTGCTACTTCTATGCTTCTTAGTGCTTCACTCTGAGATGGCTTCTGCTGCCACTTACATCGTTGGAGGTTCAGGTGGCTGGACTTTTAACCTTGTTGGCTGGCCCAAAGGAAAGCGCTTTAGAGCCGGTGACACACTTGTATTCAATTATAGCCCCGCGGCTCACAATGTGGTGGCGGTGAACAATGTTGGGTATAGTGGCTGCACGACTCCAAGAGGAGCCAAAGTGTATCGATCAGGAAAGGATCAGATAAGACTGGCTAAGGGACAGAACTACTTCATCTGCAATTTTCCCGGTCACTGTCAGGCTGGAATGAAAATCGCCATCAACGCTGCCTGA 366 0.4973 MGVGRGSAIVLLLCFLVLHSEMASAATYIVGGSGGWTFNLVGWPKGKRFRAGDTLVFNYSPAAHNVVAVNNVGYSGCTTPRGAKVYRSGKDQIRLAKGQNYFICNFPGHCQAGMKIAINAA* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2312 121 SUPERFAMILY Cupredoxins 26 120 IPR008972 -
Apr3g2312 121 Pfam Plastocyanin-like domain 39 114 IPR003245 GO:0009055
Apr3g2312 121 CDD Plantacyanin 26 120 IPR041844 -
Apr3g2312 121 ProSiteProfiles Phytocyanin domain profile. 26 121 IPR003245 GO:0009055
Apr3g2312 121 ProSitePatterns Type-1 copper (blue) proteins signature. 98 114 IPR028871 -
Apr3g2312 121 PANTHER BASIC BLUE-LIKE PROTEIN 4 119 - -
Apr3g2312 121 PANTHER BLUE COPPER PROTEIN 4 119 IPR039391 GO:0009055
Apr3g2312 121 Gene3D - 26 120 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2312 Apr-Chr3 38682065 38683389 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2312 8 120 Phytocyanin Superfamily AT1G17800 42.017 1.14e-22 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2312 - - gmx:100499869 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1152 1 19959004 19959475 Apr3g2312 3 38682065 38683389 PCT