Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2311 ATGTCTCTGGGAAGAGGCAGTGCAATGGTTGCTCTGATGCTATCATTATGCTTACTGCTTCACTCTGAGATGGCTCATGCAGCCACCTACACAGTTGGGGGTGCAAATGGTTGGACCTTTAACACTGTGGGCTGGCCCAAAGGGAAGCGGTTCAGGGCCGGTGATACACTTGTGTTCAACTACAGCCCTGGGGCTCACAATGTGGTGGCTGTAAATAAAGGTGCTTACAACGCTTGCAGGACCCCAAAAGGTGCCAAAATCTATACTTCAGGAAGTGATCAGATCAAGCTTGTGAAGGGACCGAACTACTTCATCTGCAATTTTTCTGGTCACTGCGAATCTGGCACCAAAATTGCCATTAATGCTGTCTGA 372 0.4866 MSLGRGSAMVALMLSLCLLLHSEMAHAATYTVGGANGWTFNTVGWPKGKRFRAGDTLVFNYSPGAHNVVAVNKGAYNACRTPKGAKIYTSGSDQIKLVKGPNYFICNFSGHCESGTKIAINAV* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2311 123 Pfam Plastocyanin-like domain 38 115 IPR003245 GO:0009055
Apr3g2311 123 PANTHER BLUE COPPER PROTEIN 9 121 IPR039391 GO:0009055
Apr3g2311 123 PANTHER BASIC BLUE-LIKE PROTEIN 9 121 - -
Apr3g2311 123 SUPERFAMILY Cupredoxins 28 122 IPR008972 -
Apr3g2311 123 CDD Plantacyanin 28 122 IPR041844 -
Apr3g2311 123 ProSiteProfiles Phytocyanin domain profile. 28 123 IPR003245 GO:0009055
Apr3g2311 123 Gene3D - 28 123 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2311 Apr-Chr3 38679995 38680780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2311 12 123 Phytocyanin Superfamily AT1G17800 39.831 9.72e-22 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2311 - - gmx:100499869 187.578