Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2299 ATGGAGAAGTATGAGGCGGTGAAGGATATAATAGGCTATGGGAATTTCGCGGTGGTAAGGCTTATGCGTCACAAAGAGACCAAAGAACTGGTTGCTGTCAAATGCATCCAACGGGGCCAAAGGATTGATGAGAGGGTCACAAGGGAAATCATCAACCACAGATCTCTTTGCCACCCCAATATTATTCGGTTCAAGGAGGTGGCTTTGACTCCAATTCATCTTGCAATAGTTATGGAGCATGCAGCGGGTGGAGAGCTGTTTCACAGAGTTTGCAAAGGACTACGAGAAGACGAGGCTCGATATTTCTTCCAGCAGTTGATTTCAGGAGTTAGCTATTGTCATAACATGGAAATATGTCATCGAGACTTGAAATTGGAGAACACCTTGTTGGATGGCAGCCATGCTCGACGTCTTAAAATTTGTGATTTCGGCTATTCTAAGTCATATATACTTCATTCGAAGCCTAATTCAATGGTTGGAACTCCAGCCTATATTGCACCAGAGATTATATCCGGTGGAGAATATGATGGAAAGTTGGCAGATGTATGGTCCTGTGGAGTAATACTATATACAATGTTGATGGGAGCATTGCCATTTGAGGACAAAGAGGATCGCAAAAATGTCAAGAAAACCGTAAATCGAATCGTGGCTGTTCAATACAAGTTCCCCGAAAATGTTAGCATAACTCAAGACTGCAAAAATCTGATATCTCGCATTTTTGTGGCAAATCCAGCGAAGAGAATCACCATAAAGGAAATAGAGGGCCACCCTTGGTTTTTAAAGAACTTGCCTAAGGATTTTACAGAAGATGTCTGCTACAAAAAAGAATTTGCAACCTCTTCTCTTCAAAGTATAGAAGACATCATAAACATTGTCAACGAAGCCAAAACTGCACCTACATTGAGACAATGCCTGAATTCTTGTTTCCATCAAGCTTTTATTTTCCTCTACCATTCCTAG 960 0.4135 MEKYEAVKDIIGYGNFAVVRLMRHKETKELVAVKCIQRGQRIDERVTREIINHRSLCHPNIIRFKEVALTPIHLAIVMEHAAGGELFHRVCKGLREDEARYFFQQLISGVSYCHNMEICHRDLKLENTLLDGSHARRLKICDFGYSKSYILHSKPNSMVGTPAYIAPEIISGGEYDGKLADVWSCGVILYTMLMGALPFEDKEDRKNVKKTVNRIVAVQYKFPENVSITQDCKNLISRIFVANPAKRITIKEIEGHPWFLKNLPKDFTEDVCYKKEFATSSLQSIEDIINIVNEAKTAPTLRQCLNSCFHQAFIFLYHS* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2299 319 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Apr3g2299 319 PANTHER SERINE/THREONINE KINASE 2 305 - -
Apr3g2299 319 ProSiteProfiles Protein kinase domain profile. 5 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g2299 319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 118 130 IPR008271 GO:0004672|GO:0006468
Apr3g2299 319 Pfam Protein kinase domain 8 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g2299 319 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 2 305 - -
Apr3g2299 319 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Apr3g2299 319 SUPERFAMILY Protein kinase-like (PK-like) 8 268 IPR011009 -
Apr3g2299 319 Gene3D Transferase(Phosphotransferase) domain 1 81 266 - -
Apr3g2299 319 SMART serkin_6 5 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2299 Apr-Chr3 38583621 38589668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2299 1 263 CBL-interacting serine-threonine protein kinases AT5G01810 44.203 8.87e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Apr3g2299 Pkinase 1.5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2299 K14498 - gmx:100812259 453.751