Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2295 ATGGGTAAGGGCCCTTTCTCCTTTCGCCGCTCTGCTTCCCGTCGCCGAACTAAGAAGACCGCCGGACCTTCGCCGCCGTCTCCGCCTCAGCCTCCGTATGCGGCCGGAATCGCCGCCTCGCCGGACGAGAATGCCAACAATCGCTTGATTGCCAGCAGCGGTGGCGGTGGCGGTGGCGCGTTGACGAAGGCGAAGAAGAAGACCGGCGGTGCACGGTTGTGGATGAGGTTTGACCGGTTGGGTCGGTCGGAACTCGTGGAGTGGGAGAAGAACGCAATAGTCCGCCACGCCGCGATTCCCACCAGAGACTTGAGGATTTTGGGCCCTGTCTTCTCTCACTCTTCCAATATTCTTGCGAGAGAGAAAGCGATGGTGGTTAATTTGGAGTTTATAAAGGCTATAGTAACCGCTGAAGAAGTCCTATTGCTTGATCCTCTTCGCCAAGAGGTTCTTCCGTTTGTTGAGCAACTTAGGCTACAGCTTCCGCATAAAAGTCAACCTAAACTTCTTGGCCCTGCCGAGGAACAAGAAAGTGAAATGCAGGTATCGAATGGCAGACAGTGGTTGCCTGTGCCGGAATCTGCCGAAGGTTTGCATTCTGAGCTTCCGTTTGAATTTCAAGTGCTGGAAATTGCTTTGGAGGTTGTCTGTACTTATCTGGACTCTAGTGTGGCCGACCTTGAGAGAGGTGCTTACCCTGTATTGGATGAACTGGCTAGGAATGTTAGCACCAAGAATCTTGAACACGTGCGAAGTTTGAAGAGCAATCTTACACGTTTGCTGGCTCGCGTGCAAAAGGTACGAGATGAAATTGAACATCTGTTAGATGACAGCGAAGATATGGCACAGCTATATTTGACGAGGAAGTGGTTGCAGAATCAGCAATTTGAGGCTCACTTGGGTGCCACAACATCAAATAACTTTTCTAATACTGCACATACAGTTCGCCGACTTGGTTCTAACAGAAGTGGAAGTCTTGTGACCAGCAACTATGGGGATGATAATGACGTGGAGGACTTGGAGATGTTGCTTGATGCATATTTTATGCAATTGGATGGAACTCGTAACAAGATATTATCTGTTAGGGAGTATATTGATGACACTGAAGACTATGTCAATATCCAACTTGATAACCACAGAAATGAACTTATTCAGCTGCAATTGACATTGACTATTGCATCATTTGCTATAGCCATTGAAACGTTGATTGCTGGTGTATTTGGGATGAACATTCCTTGTACATTATATAATAAGGATGGAATATTTTGGCCCTTCGTTTGGATTACTACTGCAGGTTGCGTATTGCTTTTCCTGCTTGTTTTAGCATATGCAAAATGGAAAAAGTTATTGGGATCATAA 1359 0.4695 MGKGPFSFRRSASRRRTKKTAGPSPPSPPQPPYAAGIAASPDENANNRLIASSGGGGGGALTKAKKKTGGARLWMRFDRLGRSELVEWEKNAIVRHAAIPTRDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVLPFVEQLRLQLPHKSQPKLLGPAEEQESEMQVSNGRQWLPVPESAEGLHSELPFEFQVLEIALEVVCTYLDSSVADLERGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDSEDMAQLYLTRKWLQNQQFEAHLGATTSNNFSNTAHTVRRLGSNRSGSLVTSNYGDDNDVEDLEMLLDAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAIETLIAGVFGMNIPCTLYNKDGIFWPFVWITTAGCVLLFLLVLAYAKWKKLLGS* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2295 452 MobiDBLite consensus disorder prediction 1 40 - -
Apr3g2295 452 CDD Mrs2_Mfm1p-like 74 449 IPR039204 -
Apr3g2295 452 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 5 452 IPR039204 -
Apr3g2295 452 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 388 440 IPR045863 -
Apr3g2295 452 MobiDBLite consensus disorder prediction 45 64 - -
Apr3g2295 452 Gene3D Magnesium transport protein CorA, transmembrane region 390 448 - -
Apr3g2295 452 Gene3D Magnesium transport protein CorA, transmembrane region 153 383 - -
Apr3g2295 452 PANTHER MAGNESIUM TRANSPORTER MRS2-4-RELATED 5 452 - -
Apr3g2295 452 Gene3D - 60 145 - -
Apr3g2295 452 Coils Coil 250 277 - -
Apr3g2295 452 Pfam CorA-like Mg2+ transporter protein 335 445 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2295 Apr-Chr3 38559016 38562504 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2295 1 452 MRS2 Gene Family AT3G58970 65.714 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2295 K16075 - gmx:100812561 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2295 3 38559016 38562504 Apr10g2261 10 34822463 34824834 PCT