Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2294 ATGGCGAATTCAAAGAGCTCCTCGGGTGTCAGAAATTTGATTTACCCGGGAAAGCATGCATTACTTCCTCCTAAAAGCCCGTTTCCTAGTGTTTCTCAAGCATACGCGGATTATATCCCAAATCCTGTTGTTGGTTCAAAGGCAGCTAACAGACCTAGAGAGGGAAACACACATCACCAACGTACTTCATCTGAGAGCCTTGTTATAGAGGAGCAGCCTTCATGGCTTGATGACCTTCTTAATGAGCCAGAGACACCTGTCCGAAGAGGTGGTCATCGGCGGTCGTCAAGTGATTCTTTTGCATACGTGGACATGGTTAATATGTCTAACATCAGTTATGCCGATCAAGATGAATATAAATATAAGAATTTGATGTCTATTCCATCTTGGTCACCTCAAGACTTTGACCGCAGCAAAGATGCTTGTCATTTACCTGTTTATGCTGAAATAAACTCAGCAAAACAGAAAAATAGATCATGGGACTCTTTTTCAAATGCCGTGACAAATGCAGGTGGTGTTCCTTCTGGGAAAGACACTGTTACTTTTCAGGGTTCAGGATTGCCAAATACGACACATGAAGCAGATGTGCTTCTACCAATCGCAAATGAGAAACATGATTCAGTAGAATCTGGCTTACAAGACGCAAAATCAATTTCTGAAAAAAAGGATGGTTCACATGCGAAGTCATCTGCCTCTGAAACAGATACAAAACGTGCTAAACAGCAATTTGCTCAACGATCACGGGTCCGGAAACTACAATATATAGCTGAGCTGGAAAGAAATGTACAAGCTTTACAGGCTGAAGGGTCTGAAGTCTCAGCTGAGCTCGAGTTTCTTAACCAGCAGAATCTTATCCTGAGTATGGAGAATAAAGCACTCAAGCAACGTTTAGAAAGTTTAGCACAGGAGCAGCTTATCAAATATTTGGAACAGGAAGTACTGGAAAGAGAGATTGGAAGATTACGCACATTGTATCAGCAGCAGCAGCAGCCACAGACACATCAGCCACAACAGCAACCATCTGCTAGTCATAGACGCACAAACAGCAGAGACCTTGAATCTCAGTTTGCAAATCTTTCTCTAAAACACAAGGATACCAATTCAGGGCATGACCCTGCTACTGGAGCACTCAGAATTTAG 1140 0.4263 MANSKSSSGVRNLIYPGKHALLPPKSPFPSVSQAYADYIPNPVVGSKAANRPREGNTHHQRTSSESLVIEEQPSWLDDLLNEPETPVRRGGHRRSSSDSFAYVDMVNMSNISYADQDEYKYKNLMSIPSWSPQDFDRSKDACHLPVYAEINSAKQKNRSWDSFSNAVTNAGGVPSGKDTVTFQGSGLPNTTHEADVLLPIANEKHDSVESGLQDAKSISEKKDGSHAKSSASETDTKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKYLEQEVLEREIGRLRTLYQQQQQPQTHQPQQQPSASHRRTNSRDLESQFANLSLKHKDTNSGHDPATGALRI* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2294 379 MobiDBLite consensus disorder prediction 42 68 - -
Apr3g2294 379 MobiDBLite consensus disorder prediction 208 242 - -
Apr3g2294 379 SUPERFAMILY Leucine zipper domain 244 286 IPR046347 GO:0003700|GO:0006355
Apr3g2294 379 SMART brlzneu 233 292 IPR004827 GO:0003700|GO:0006355
Apr3g2294 379 MobiDBLite consensus disorder prediction 325 379 - -
Apr3g2294 379 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN 1 367 - -
Apr3g2294 379 MobiDBLite consensus disorder prediction 208 244 - -
Apr3g2294 379 Coils Coil 248 303 - -
Apr3g2294 379 MobiDBLite consensus disorder prediction 325 345 - -
Apr3g2294 379 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 1 367 IPR044797 -
Apr3g2294 379 CDD bZIP_plant_RF2 235 283 IPR044759 GO:0003700|GO:0006355
Apr3g2294 379 Gene3D - 238 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2294 Apr-Chr3 38549544 38554787 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2294 20 307 bZIP Transcription Factor Family AT2G42380 29.276 1.14e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2294 - - gmx:100813098 622.468