Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2290 ATGGAAAGCGTTGCCGCGCAGCTGAAGCGCGGCATCTCGCGGCAGTTCTCGGCGGGGTCGCTGCGGAAGAACCTTTCGCGCCAGTTCACGCGGCAGGCCTCGCTGGATCCGCGGCGGAACAATCTCCGATTCAGCTTCGGACGCCAGTCCTCGCTCGATCCAATTCGGCGGAGTCCGGCCTCCGACCAGGCGAAGCTTACGGTCCCCGAGAATCTGGACTCGACGATGCAGCTTCTGTTCATGGCCTGTAGAGGTGATGTTAAGGGAGTGGAGGATTTGCTCGACGAAGGCATTGACGTCAATAGTATCGACCTTGACGGCCGCACCGCCCTCCACATCGCCGCCTGCGAGGGCCACGTCGAAGTTGCTAGGCTCTTGCTCACGCGCAAGGCCAACATCGACGCTCGTGATCGCTGGGGCAGTACGGCAGCGGCTGATGCAAAATATTATGGAAATACAGAAGTTTATTACATGTTGAAGGCCCGTGGAGCAAAAGTGCCGAAAACCAGAAAGACTCCAATGACTGTTGCAAATCCTCGTGAAGTTCCAGAATATGAACTCAACCCATTAGAACTACAGGTTCGGAAGAGTGATGGTATTTCAAAGGGAACATATCAAGTAGCAAAATGGAATGGCACAAAGGTTGCAGTGAAGATACTTGACAAGGACAGTTATTCAGATCCTGAAACCATAAATGCTTTCAAACATGAACTCACAATATTAGAAAGGGTGCGACATCCTAATGTGGTCCAGTTTGTTGGAGCTGTCACCCAAAATATACCTATGATGATTGTGCGTGAGTACCATGCTAAGGGTGACCTGGCAAGCTATCTTCAAAAGAAAGGGCGTTTGTCCCCATCAAAAGTTCTACGGCTTTCTCTTGATATTGCTAGGGGCATGAACTATCTTCATGAGTGCAAACCAGATCCGGTTATCCACTGTGATTTAAAGCCAAAAAATATTTTGCTGGATAATGGAGGGCAATTGAAAATAGCTGGATTTGGCACTGTGGGATTTTCGCTAATCTCACCTGATAAAGCAAAGCTGGTAGAGCCCGAGGCTACCATTGACCGTTCAAGCTTGTACGTGGCACCGGAAATTTACAAAGACGATGTATTTGATAGAAGTGTGGATGCATATTCTTTTGGTCTCATTGTATATGAGATGATAGAGGGTGTACAGCCCTTACATCCCAAGCCCCCGGAGGAGGCAGTGAAACTGTTGTGCTTAGAAGGGAAAAGACCCCCATTCAAGATCAAAACAAAACATTATCCTCCGGATTTGAAAGAATTGATTGAGGAATGTTGGGATCCACAACCTGTTGTCAGGCCAACATTTTCTCAGGTCATTGTACGGCTGGACAAAATTGTTGCAAATTGCTCAAAACAAGGATGGTGGAAAGATACTTTTAAACTTCCTTGGAAATAA 1428 0.479 MESVAAQLKRGISRQFSAGSLRKNLSRQFTRQASLDPRRNNLRFSFGRQSSLDPIRRSPASDQAKLTVPENLDSTMQLLFMACRGDVKGVEDLLDEGIDVNSIDLDGRTALHIAACEGHVEVARLLLTRKANIDARDRWGSTAAADAKYYGNTEVYYMLKARGAKVPKTRKTPMTVANPREVPEYELNPLELQVRKSDGISKGTYQVAKWNGTKVAVKILDKDSYSDPETINAFKHELTILERVRHPNVVQFVGAVTQNIPMMIVREYHAKGDLASYLQKKGRLSPSKVLRLSLDIARGMNYLHECKPDPVIHCDLKPKNILLDNGGQLKIAGFGTVGFSLISPDKAKLVEPEATIDRSSLYVAPEIYKDDVFDRSVDAYSFGLIVYEMIEGVQPLHPKPPEEAVKLLCLEGKRPPFKIKTKHYPPDLKELIEECWDPQPVVRPTFSQVIVRLDKIVANCSKQGWWKDTFKLPWK* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2290 475 PRINTS Tyrosine kinase catalytic domain signature 266 279 IPR001245 GO:0004672|GO:0006468
Apr3g2290 475 PRINTS Tyrosine kinase catalytic domain signature 305 323 IPR001245 GO:0004672|GO:0006468
Apr3g2290 475 PRINTS Tyrosine kinase catalytic domain signature 377 399 IPR001245 GO:0004672|GO:0006468
Apr3g2290 475 PRINTS Tyrosine kinase catalytic domain signature 424 446 IPR001245 GO:0004672|GO:0006468
Apr3g2290 475 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 33 473 - -
Apr3g2290 475 CDD STKc_MAP3K-like 200 453 - -
Apr3g2290 475 Pfam Protein tyrosine and serine/threonine kinase 200 452 IPR001245 GO:0004672|GO:0006468
Apr3g2290 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Apr3g2290 475 SUPERFAMILY Ankyrin repeat 75 175 IPR036770 -
Apr3g2290 475 ProSiteProfiles Ankyrin repeat profile. 106 138 IPR002110 GO:0005515
Apr3g2290 475 Pfam Ankyrin repeats (many copies) 93 143 IPR002110 GO:0005515
Apr3g2290 475 SMART ANK_2a 106 135 IPR002110 GO:0005515
Apr3g2290 475 SMART ANK_2a 74 102 IPR002110 GO:0005515
Apr3g2290 475 Gene3D Transferase(Phosphotransferase) domain 1 271 471 - -
Apr3g2290 475 SMART serkin_6 194 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g2290 475 ProSiteProfiles Ankyrin repeat region circular profile. 106 138 - -
Apr3g2290 475 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 33 473 - -
Apr3g2290 475 Gene3D Phosphorylase Kinase; domain 1 187 269 - -
Apr3g2290 475 ProSiteProfiles Protein kinase domain profile. 190 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g2290 475 SUPERFAMILY Protein kinase-like (PK-like) 203 453 IPR011009 -
Apr3g2290 475 PIRSF ILK 8 474 - -
Apr3g2290 475 Gene3D - 39 185 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2290 Apr-Chr3 38511484 38517609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2290 1 475 MAP Kinase Kinase Kinase AT2G31800 78.361 0.0 803
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Apr3g2290 PK_Tyr_Ser-Thr 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2290 - - aprc:113857978 956.436