Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2283 ATGGTGGTGACCAACCTTGTAGTCTTGCCAGCAGTTATACTATTCCTTGTCCTTTGTCTACATTTCATCATAAAAATTGTCAAATTTAGAAAGCATGCAAACCTGCATCTTCCTCCCGGAAGTTTAGGATGGCCTATTGTTGGAGAAACCTTTGATTTTATGCGTACATGTCTTGATGGAAGCATGTTAAGGTTCATAAAAGAGAGAATGGACAAATATGACTCAAGGGTGTTCAAGACTTCAGTGTTTGGAAATCCTATAATTGTGTTTTGTGGTGCAGCTGGGAACAAGTTCTTATTCAGCAACGAGAACAAGAATGTCCAAGTGTGGTGGCCTAGCTCGGTGAGGAAGCTGCTGAGGTTGTCTCTTGTTACTAAGGTTGGTGATGAAGCAAAGATGGTGAGAAGGTTGCTCATGAGCTTTCTTAATGCAGAAACACTCAGAAATTACTTGCCAAAAATGGATAGCATTGCTCAGCGCCATTTAGACAAACATTGGGAAGGAAAGGAGCAGGTGCATGTCTATCCCATAGTACAGCTATACACGTTTGAATTGGCCTGTTGCTTATTTTTAAGCATCGAAGACTCTATCCAGATAGCAAAGCTTTCATTAAAATTTGATGAATTTCTGAAAGGGATTATTGGCTTCCCCATCAACATTCCTGGAACAAGGTTTCATCGGGCAATGAAAGCTGCAAGTGCAATAAGGAAAGAAATTAAAATGATTCTAAAGAAAAGGAAAGTGGATTTGGAAGAGAAGAGGGCATCACCAACCCAAGACCTTCTATCACATATGCTTGTTACGTCTGACACCAATGGAAGGTTTATGACCGAAATGGAGATAATTGATAACATACTTCTTCTACTTTTTGCTGGCCATGACACTTCTAGGTCAGTGTTATCACTGGTCATGAACTATCTAGGACAGTTACCTGAAGTTTATGAGAATGTGTTGAAAGAACAACTTGAAATTAGTCAAGGGAAAGAGGCAGGGCATTTTTTGCAATGGGAAGATGTTCAGAAAATGAAATACTCTTGGAATGTTGCATCTGAAGTCATGAGGCTGTCGCCACCTGTAGGTGGTGCTTACAGAGAAGCTATAAAGGATTTCACCTATGCTGATTATAACATCCCTAAAGGGTGGAAGTTGCATTGGAGCACTGGTTCATCACACATGGATCCAACACTCTTCTCAAATCCTGAAATTTTTGATGCCTCAAGATTTGAAGGAGCAGGGCCTACACCCTTTTCATATGTTCCATTTGGAGGAGGACCGAGAATGTGTTTGGGGCAAGAGTTTGCAAGACTAGAGATACTTGTGTTTATGCATTACATTGTGAAACGGTTCAAGTGGGATCTGGTGAATCCCAATGAGAAGTTTAGGTATGATCCCATGCTAGAACCAGAAAAAGGACTTGCACTTCGACTTCACCGCTGTCATTTCTAG 1446 0.4087 MVVTNLVVLPAVILFLVLCLHFIIKIVKFRKHANLHLPPGSLGWPIVGETFDFMRTCLDGSMLRFIKERMDKYDSRVFKTSVFGNPIIVFCGAAGNKFLFSNENKNVQVWWPSSVRKLLRLSLVTKVGDEAKMVRRLLMSFLNAETLRNYLPKMDSIAQRHLDKHWEGKEQVHVYPIVQLYTFELACCLFLSIEDSIQIAKLSLKFDEFLKGIIGFPINIPGTRFHRAMKAASAIRKEIKMILKKRKVDLEEKRASPTQDLLSHMLVTSDTNGRFMTEMEIIDNILLLLFAGHDTSRSVLSLVMNYLGQLPEVYENVLKEQLEISQGKEAGHFLQWEDVQKMKYSWNVASEVMRLSPPVGGAYREAIKDFTYADYNIPKGWKLHWSTGSSHMDPTLFSNPEIFDASRFEGAGPTPFSYVPFGGGPRMCLGQEFARLEILVFMHYIVKRFKWDLVNPNEKFRYDPMLEPEKGLALRLHRCHF* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2283 481 Pfam Cytochrome P450 38 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2283 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Apr3g2283 481 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2283 481 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2283 481 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2283 481 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2283 481 PANTHER CYTOCHROME P450 26 16 468 - -
Apr3g2283 481 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2283 481 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2283 481 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2283 481 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2283 481 SUPERFAMILY Cytochrome P450 32 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2283 481 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE ISOFORM X1 16 468 - -
Apr3g2283 481 Gene3D Cytochrome P450 26 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2283 Apr-Chr3 38446790 38450104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2283 36 383 Cytochrome P450 AT5G36110 45.014 4.35e-104 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2283 - K20667 gmx:100808690 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2283 3 38446790 38450104 Apr3g2283 3 38446790 38450104 ECH